Molecular landmarks of tumor hypoxia across cancer types V Bhandari, C Hoey, LY Liu, E Lalonde, J Ray, J Livingstone, R Lesurf, ... Nature genetics 51 (2), 308-318, 2019 | 608 | 2019 |
A clinically applicable integrative molecular classification of meningiomas F Nassiri, J Liu, V Patil, Y Mamatjan, JZ Wang, R Hugh-White, AM Macklin, ... Nature 597 (7874), 119-125, 2021 | 321 | 2021 |
The evolutionary landscape of localized prostate cancers drives clinical aggression SMG Espiritu, LY Liu, Y Rubanova, V Bhandari, EM Holgersen, LM Szyca, ... Cell 173 (4), 1003-1013. e15, 2018 | 254 | 2018 |
A pan-cancer compendium of chromosomal instability RM Drews, B Hernando, M Tarabichi, K Haase, T Lesluyes, PS Smith, ... Nature 606 (7916), 976-983, 2022 | 210 | 2022 |
Precision radiotherapy: reduction in radiation for oropharyngeal cancer in the 30 ROC trial N Riaz, E Sherman, X Pei, H Schöder, M Grkovski, R Paudyal, N Katabi, ... JNCI: Journal of the National Cancer Institute 113 (6), 742-751, 2021 | 147 | 2021 |
A community effort to create standards for evaluating tumor subclonal reconstruction A Salcedo, M Tarabichi, SMG Espiritu, AG Deshwar, M David, NM Wilson, ... Nature biotechnology 38 (1), 97-107, 2020 | 78* | 2020 |
Proteomic discovery of non-invasive biomarkers of localized prostate cancer using mass spectrometry A Khoo, LY Liu, JO Nyalwidhe, OJ Semmes, D Vesprini, MR Downes, ... Nature Reviews Urology 18 (12), 707-724, 2021 | 45 | 2021 |
Quantifying the influence of mutation detection on tumour subclonal reconstruction LY Liu, V Bhandari, A Salcedo, SMG Espiritu, QD Morris, T Kislinger, ... Nature Communications 11 (1), 1-15, 2020 | 23* | 2020 |
Prostate cancer multiparametric magnetic resonance imaging visibility is a tumor-intrinsic phenomena A Khoo, LY Liu, TY Sadun, A Salmasi, A Pooli, E Felker, KE Houlahan, ... Journal of hematology & oncology 15 (1), 48, 2022 | 14 | 2022 |
Glycoproteomics Identifies Plexin-B3 as a Targetable Cell Surface Protein Required for the Growth and Invasion of Triple-Negative Breast Cancer Cells L Kuhlmann, M Govindarajan, S Mejia-Guerrero, V Ignatchenko, LY Liu, ... Journal of Proteome Research 21 (9), 2224-2236, 2022 | 10 | 2022 |
Prostate cancer reshapes the secreted and extracellular vesicle urinary proteomes A Khoo, M Govindarajan, Z Qiu, LY Liu, V Ignatchenko, M Waas, ... Nature Communications 15 (1), 5069, 2024 | 6 | 2024 |
Neoadjuvant Exercise Therapy in Prostate Cancer: A Phase 1, Decentralized Nonrandomized ControlledTrial LW Jones, CS Moskowitz, CP Lee, GA Fickera, SS Chun, MG Michalski, ... JAMA oncology 10 (9), 1187-1194, 2024 | 4 | 2024 |
Metapipeline-DNA: A Comprehensive Germline & Somatic Genomics Nextflow Pipeline Y Patel, C Zhu, TN Yamaguchi, NK Wang, N Wiltsie, AE Gonzalez, ... bioRxiv, 2024 | 2 | 2024 |
A digital, decentralized trial of exercise therapy in patients with cancer WP Underwood, MG Michalski, CP Lee, GA Fickera, SS Chun, SE Eng, ... npj Digital Medicine 7 (1), 304, 2024 | 1 | 2024 |
Orphan noncoding RNAs: novel regulators and cancer biomarkers M Teng, LY Liu, JT Hua, S Chen, HH He Annals of translational medicine 7 (Suppl 1), 2019 | 1 | 2019 |
The Germline and Somatic Origins of Prostate Cancer Heterogeneity TN Yamaguchi, KE Houlahan, H Zhu, N Kurganovs, J Livingstone, NS Fox, ... Cancer Discovery, 2025 | | 2025 |
moPepGen: Rapid and Comprehensive Identification of Non-canonical Peptides C Zhu, LY Liu, A Ha, TN Yamaguchi, H Zhu, R Hugh-White, J Livingstone, ... bioRxiv, 2024 | | 2024 |
Divergent Evolution in Bilateral Prostate Cancer: a Case Study R Haas, Y Patel, LY Liu, RR Huang, A Weiner, TN Yamaguchi, R Agrawal, ... medRxiv, 2024.08. 22.24312320, 2024 | | 2024 |
Quantifying the seed sensitivity of cancer subclonal reconstruction algorithms PL Steinberg, LY Liu, A Neiman-Golden, Y Patel, PC Boutros bioRxiv, 2024.02. 05.579021, 2024 | | 2024 |
Exercise and tumor genomic landscapes in 2,879 patients with cancer BL Tsai, LY Liu, SE Eng, WP Underwood, CP Lee, JW Bliss, PC Boutros, ... Cancer Research 83 (7_Supplement), 3121-3121, 2023 | | 2023 |