| Proliferation of cells with HIV integrated into cancer genes contributes to persistent infection TA Wagner, S McLaughlin, K Garg, CYK Cheung, BB Larsen, S Styrchak, ... Science 345 (6196), 570-573, 2014 | 749 | 2014 |
| Increased HIV-1 vaccine efficacy against viruses with genetic signatures in Env V2 M Rolland, PT Edlefsen, BB Larsen, S Tovanabutra, E Sanders-Buell, ... Nature 490 (7420), 417-420, 2012 | 494 | 2012 |
| The emergence of sars-cov-2 in europe and north america M Worobey, J Pekar, BB Larsen, MI Nelson, V Hill, JB Joy, A Rambaut, ... Science 370 (6516), 564-570, 2020 | 447 | 2020 |
| Inordinate fondness multiplied and redistributed: the number of species on earth and the new pie of life BB Larsen, EC Miller, MK Rhodes, JJ Wiens The Quarterly Review of Biology 92 (3), 229-265, 2017 | 406 | 2017 |
| Emergence and rapid transmission of SARS-CoV-2 B. 1.1. 7 in the United States NL Washington, K Gangavarapu, M Zeller, A Bolze, ET Cirulli, ... Cell 184 (10), 2587-2594. e7, 2021 | 294 | 2021 |
| Genomic epidemiology identifies emergence and rapid transmission of SARS-CoV-2 B. 1.1. 7 in the United States NL Washington, K Gangavarapu, M Zeller, A Bolze, ET Cirulli, ... MedRxiv, 2021 | 107 | 2021 |
| Analysis of HLA A* 02 association with vaccine efficacy in the RV144 HIV-1 vaccine trial AJ Gartland, S Li, J McNevin, GD Tomaras, R Gottardo, H Janes, Y Fong, ... Journal of virology 88 (15), 8242-8255, 2014 | 77 | 2014 |
| HIV-1 conserved-element vaccines: relationship between sequence conservation and replicative capacity M Rolland, S Manocheewa, JV Swain, EC Lanxon-Cookson, M Kim, ... Journal of virology 87 (10), 5461-5467, 2013 | 66 | 2013 |
| Comprehensive sieve analysis of breakthrough HIV-1 sequences in the RV144 vaccine efficacy trial PT Edlefsen, M Rolland, T Hertz, S Tovanabutra, AJ Gartland, ... PLoS computational biology 11 (2), e1003973, 2015 | 65 | 2015 |
| A near full-length HIV-1 genome from 1966 recovered from formalin-fixed paraffin-embedded tissue S Gryseels, TD Watts, JM Kabongo Mpolesha, BB Larsen, P Lemey, ... Proceedings of the National Academy of Sciences 117 (22), 12222-12229, 2020 | 50 | 2020 |
| Fitness-balanced escape determines resolution of dynamic founder virus escape processes in HIV-1 infection JE Sunshine, BB Larsen, B Maust, E Casey, W Deng, L Chen, DH Westfall, ... Journal of virology 89 (20), 10303-10318, 2015 | 38 | 2015 |
| Evolution and diversity of bat and rodent paramyxoviruses from North America BB Larsen, S Gryseels, HW Otto, M Worobey Journal of virology 96 (3), e01098-21, 2022 | 29 | 2022 |
| An early pandemic analysis of SARS-CoV-2 population structure and dynamics in Arizona JT Ladner, BB Larsen, JR Bowers, CM Hepp, E Bolyen, M Folkerts, ... MBio 11 (5), 10.1128/mbio. 02107-20, 2020 | 28 | 2020 |
| Indel and Carryforward Correction (ICC): a new analysis approach for processing 454 pyrosequencing data W Deng, BS Maust, DH Westfall, L Chen, H Zhao, BB Larsen, S Iyer, Y Liu, ... Bioinformatics 29 (19), 2402-2409, 2013 | 21 | 2013 |
| Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity E Bolyen, MR Dillon, NA Bokulich, JT Ladner, BB Larsen, CM Hepp, ... F1000Research 9, 2020 | 20 | 2020 |
| A study of vaccine-induced immune pressure on breakthrough infections in the Phambili phase 2b HIV-1 vaccine efficacy trial T Hertz, MG Logan, M Rolland, CA Magaret, C Rademeyer, ... Vaccine 34 (47), 5792-5801, 2016 | 20 | 2016 |
| Dendritic Cells Restore CD8+ T Cell Reactivity to Autologous HIV-1 KN Smith, RB Mailliard, BB Larsen, K Wong, P Gupta, JI Mullins, ... Journal of virology 88 (17), 9976-9990, 2014 | 19 | 2014 |
| Comparison of major and minor viral SNPs identified through single template sequencing and pyrosequencing in acute HIV-1 infection S Iyer, E Casey, H Bouzek, M Kim, W Deng, BB Larsen, H Zhao, ... PLoS One 10 (8), e0135903, 2015 | 18 | 2015 |
| Ancient DNA provides evidence of 27,000-year-old papillomavirus infection and long-term codivergence with rodents BB Larsen, KL Cole, M Worobey Virus Evolution 4 (1), vey014, 2018 | 16 | 2018 |
| Increased HIV-1 vaccine efficacy against viruses with genetic signatures in Env V2. Nature490: 417–420 M Rolland, PT Edlefsen, BB Larsen, S Tovanabutra, E Sanders-Buell, ... | 16 | 2012 |
