Nextstrain: real-time tracking of pathogen evolution J Hadfield, C Megill, SM Bell, J Huddleston, B Potter, C Callender, ... Bioinformatics 34 (23), 4121-4123, 2018 | 3258 | 2018 |
Emergence and spread of SARS-CoV-2 lineage B. 1.620 with variant of concern-like mutations and deletions G Dudas, SL Hong, BI Potter, S Calvignac-Spencer, FS Niatou-Singa, ... Nature communications 12 (1), 5769, 2021 | 85 | 2021 |
Gene Balance Predicts Transcriptional Responses Immediately Following Ploidy Change in Arabidopsis thaliana MJ Song, BI Potter, JJ Doyle, JE Coate The Plant Cell 32 (5), 1434-1448, 2020 | 69 | 2020 |
Evolution and rapid spread of a reassortant A (H3N2) virus that predominated the 2017–2018 influenza season BI Potter, R Kondor, J Hadfield, J Huddleston, J Barnes, T Rowe, L Guo, ... Virus evolution 5 (2), vez046, 2019 | 33 | 2019 |
Genomic epidemiology supports multiple introductions and cryptic transmission of Zika virus in Colombia A Black, LH Moncla, K Laiton-Donato, B Potter, L Pardo, A Rico, C Tovar, ... BMC infectious diseases 19, 1-11, 2019 | 30 | 2019 |
Exploiting genomic surveillance to map the spatio-temporal dispersal of SARS-CoV-2 spike mutations in Belgium across 2020 N Bollen, M Artesi, K Durkin, SL Hong, B Potter, B Boujemla, ... Scientific reports 11 (1), 18580, 2021 | 14 | 2021 |
Helicobacter pylori diversification during chronic infection within a single host generates sub-populations with distinct phenotypes LK Jackson, B Potter, S Schneider, M Fitzgibbon, K Blair, H Farah, ... PLoS pathogens 16 (12), e1008686, 2020 | 14 | 2020 |
Two years of genomic surveillance in Belgium during the SARS-CoV-2 pandemic to attain country-wide coverage and monitor the introduction and spread of emerging variants L Cuypers, S Dellicour, SL Hong, BI Potter, B Verhasselt, N Vereecke, ... Viruses 14 (10), 2301, 2022 | 13 | 2022 |
Genome-wide diversity of Zika virus: Exploring spatio-temporal dynamics to guide a new nomenclature proposal SG Seabra, PJK Libin, K Theys, A Zhukova, BI Potter, ... Virus evolution 8 (1), veac029, 2022 | 9 | 2022 |
Scalable Bayesian divergence time estimation with ratio transformations X Ji, AA Fisher, S Su, JL Thorne, B Potter, P Lemey, G Baele, MA Suchard Systematic Biology 72 (5), 1136-1153, 2023 | 8 | 2023 |
Seasonal influenza circulation patterns and projections for September 2019 to September 2020 T Bedford, J Huddleston, B Potter, RA Neher bioRxiv, 780627, 2019 | 7 | 2019 |
Variant analysis of SARS-CoV-2 genomes from belgian military personnel engaged in overseas missions and operations JP Pirnay, P Selhorst, SL Hong, C Cochez, B Potter, P Maes, M Petrillo, ... Viruses 13 (7), 1359, 2021 | 6 | 2021 |
Two separate clusters of SARS-CoV-2 delta variant infections in a group of 41 students travelling from India: an illustration of the need for rigorous testing and quarantine J Van Elslande, F Kerckhofs, L Cuypers, E Wollants, B Potter, ... Viruses 14 (6), 1198, 2022 | 5 | 2022 |
Genetic characterization of the Zika virus epidemic in the US Virgin Islands A Black, B Potter, G Dudas, L Feldstein, ND Grubaugh, KG Andersen, ... bioRxiv, 113100, 2017 | 5 | 2017 |
Travel-driven emergence and spread of SARS-CoV-2 lineage B. 1.620 with multiple VOC-like mutations and deletions in Europe 3 G Dudas, SL Hong, B Potter, FS Niatou-Singa, TB Tombolomako, ... Sylvie Behillil 15 (2021.2005), 2004.21256637, 2021 | 4 | 2021 |
Emergence of the B. 1.214. 2 SARS-CoV-2 lineage with an Omicron-like spike insertion and a unique upper airway immune signature A Holtz, J Van Weyenbergh, SL Hong, L Cuypers, Á O’Toole, G Dudas, ... BMC Infectious Diseases 24 (1), 1139, 2024 | 1 | 2024 |
SARS-CoV-2 genomic surveillance in Rwanda: Introductions and local transmission of the B. 1.617. 2 (Delta) variant of concern Y Butera, SL Hong, M Semakula, N Bollen, V Hill, ÁN O’Toole, BI Potter, ... medRxiv, 2022.05. 31.22275802, 2022 | 1 | 2022 |
Phylodynamics and Genomic Epidemiology of Viral Pathogens BI Potter, G Baele, M Gill | | 2025 |
Contemporary and historical human migration patterns shape hepatitis B virus diversity BI Potter, M Thijssen, NS Trovão, A Pineda-Peña, M Reynders, T Mina, ... Virus Evolution 10 (1), veae009, 2024 | | 2024 |
Leveraging tools from Nextstrain for bespoke phylogenetic analysis of viral pathogen epidemics BI Potter, J Huddleston, C Roemer, E Harkins, I Aksamentov, J Hadfield, ... Mathematical and Computational Evolutionary Biology, Location: Chateau d'Oex …, 2023 | | 2023 |