| Mass spectrometry–based protein identification in proteomics—a review Z Noor, SB Ahn, MS Baker, S Ranganathan, A Mohamedali Briefings in bioinformatics 22 (2), 1620-1638, 2021 | 121 | 2021 |
| Clinically relevant post-translational modification analyses—maturing workflows and bioinformatics tools D Pascovici, JX Wu, MJ McKay, C Joseph, Z Noor, K Kamath, Y Wu, ... International journal of molecular sciences 20 (1), 16, 2018 | 60 | 2018 |
| Exploration of novel inhibitors for class I histone deacetylase isoforms by QSAR modeling and molecular dynamics simulation assays Z Noor, N Afzal, S Rashid PLoS One 10 (10), e0139588, 2015 | 29 | 2015 |
| Use of a recombinant biomarker protein DDA library increases DIA coverage of low abundance plasma proteins SB Ahn, KS Kamath, A Mohamedali, Z Noor, JX Wu, D Pascovici, ... Journal of proteome research 20 (5), 2374-2389, 2021 | 12 | 2021 |
| iSwathX: an interactive web-based application for extension of DIA peptide reference libraries Z Noor, JX Wu, D Pascovici, A Mohamedali, MP Molloy, MS Baker, ... Bioinformatics 35 (3), 538-539, 2019 | 12 | 2019 |
| Leveraging homologies for cross-species plasma proteomics in ungulates using data-independent acquisition Z Noor, S Paramasivan, P Ghodasara, S Chemonges, R Gupta, S Kopp, ... Journal of Proteomics 250, 104384, 2022 | 10 | 2022 |
| Plasma proteomic changes in response to surgical trauma and a novel transdermal analgesic treatment in dogs HG Ravuri, P Sadowski, Z Noor, N Satake, PC Mills Journal of Proteomics 265, 104648, 2022 | 9 | 2022 |
| Proteomic-based stratification of intermediate-risk prostate cancer patients Q Zhong, R Sun, AT Aref, Z Noor, A Anees, Y Zhu, N Lucas, RC Poulos, ... Life Science Alliance 7 (2), 2024 | 7 | 2024 |
| PIONEER: Pipeline for Generating High‐Quality Spectral Libraries for DIA‐MS Data SS Manda, Z Noor, PG Hains, Q Zhong Current Protocols 1 (3), e69, 2021 | 6 | 2021 |
| Data-independent acquisition enables robust quantification of 400 proteins in non-depleted canine plasma HG Ravuri, Z Noor, PC Mills, N Satake, P Sadowski Proteomes 10 (1), 9, 2022 | 4 | 2022 |
| Quantification of proteins from proteomic analysis Z Noor, S Adhikari, S Ranganathan, A Mohamedali Encyclopedia of bioinformatics and computational biology: ABC of …, 2019 | 3 | 2019 |
| GLY67ARG substitution in RSPO4 disrupts the WNT signaling pathway due to an abnormal binding pattern with LGRs leading to anonychia SI Raza, AK Navid, Z Noor, K Shah, NR Dar, W Ahmad, S Rashid RSC Advances 7 (28), 17357-17366, 2017 | 3 | 2017 |
| Pan-cancer diagnostic proteomic signature of tissue-of-origin (TOO) using data-independent acquisition mass spectrometry (DIA-MS) from 1289 human tissue samples. E Boys, J Liu, Z Cai, Z Noor, KL Mackenzie, A Aref, E Sykes, D Xavier, ... Journal of Clinical Oncology 41 (16_suppl), 3120-3120, 2023 | 2 | 2023 |
| iSwathX 2.0 for processing DDA spectral libraries for DIA data analysis Z Noor, A Mohamedali, S Ranganathan Current Protocols in Bioinformatics 70 (1), e101, 2020 | 2 | 2020 |
| Bioinformatics approaches for improving seminal plasma proteome analysis Z Noor, S Ranganathan Theriogenology 137, 43-49, 2019 | 2 | 2019 |
| A proteomic signature associated with prognosis in HPV-related locally advanced oropharyngeal squamous cell carcinoma (LA-OPSCC). J Liu, C Jackson, A Anees, Z Noor, S Williams, S Porceddu, H Liu, ... Journal of Clinical Oncology 41 (16_suppl), 6055-6055, 2023 | 1 | 2023 |
| Identification of proteins from proteomic analysis Z Noor, A Mohamedali, S Ranganathan Encyclopedia of bioinformatics and computational biology: ABC of …, 2019 | 1 | 2019 |
| Federated deep learning enables cancer subtyping by proteomics Z Cai, EL Boys, Z Noor, A Aref, D Xavier, N Lucas, SG Williams, JMS Koh, ... bioRxiv, 2024.10. 16.618763, 2024 | | 2024 |
| Prostate Tumors from HOXB13 G84E Rare Variant Carriers Have Distinct Proteome and Transcriptome Signatures Compared To Noncarriers. K Raspin, Z Noor, A Aref, CH Jung, S Donovan, S Williams, P Hains, ... Twin Research and Human Genetics, 2023 | | 2023 |
| A 19-protein signature to predict outcomes in a cohort of stage II and III CRC. R Habib, A Aref, A Anees, M Pathan, D McLeod, RL Balleine, ... Journal of Clinical Oncology 41 (16_suppl), 3129-3129, 2023 | | 2023 |