Brian Ondov

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Adam M. PhillippyDirector, Center for Genomics and Data Science Research, NHGRI, NIHPotvrđena adresa e-pošte na nih.gov
Nicholas BergmanDirector, National Biodefense Analysis and Countermeasures CenterPotvrđena adresa e-pošte na st.dhs.gov
Sergey KorenAssociate Investigator, NHGRI/NIHPotvrđena adresa e-pošte na nih.gov
Todd J. TreangenAssociate Professor, Department of Computer Science, Rice UniversityPotvrđena adresa e-pošte na rice.edu
Páll MelstedProfessor of Computer Science, University of IcelandPotvrđena adresa e-pošte na hi.is
Karla D Passalacqua, Ph.D.Henry Ford Health SystemPotvrđena adresa e-pošte na umich.edu
Niklas ElmqvistVillum Investigator and Professor of Computer Science, Aarhus UniversityPotvrđena adresa e-pošte na cs.au.dk
David Téa OkouAdjunct Assistant Professor of PediatricsPotvrđena adresa e-pošte na emory.edu
Steven FranconeriProfessor, Northwestern UniversityPotvrđena adresa e-pošte na northwestern.edu
Daniel D SommerNational Biodefense Analysis and Countermeasures CenterPotvrđena adresa e-pošte na nbacc.dhs.gov
Dina Demner-FushmanNational Library of MedicinePotvrđena adresa e-pošte na mail.nih.gov
Michael E. ZwickSenior Vice President for Research, Rutgers UniversityPotvrđena adresa e-pošte na rutgers.edu
Gabriel J. StarrettLaboratory of Cellular Oncology, National Cancer InstitutePotvrđena adresa e-pošte na nih.gov
Chris Buck; Christopher BuckSenior Investigator, National Cancer InstitutePotvrđena adresa e-pošte na mail.nih.gov
Anna SappingtonMassachusetts Institute of TechnologyPotvrđena adresa e-pošte na mit.edu
Kush AttalPotvrđena adresa e-pošte na mail.wlu.edu
Aaron DarlingIndependentPotvrđena adresa e-pošte na illumina.com
Mihai PopProfessor of Computer Science, University of Maryland, College ParkPotvrđena adresa e-pošte na umd.edu
Shashikala RatnayakeNBACCPotvrđena adresa e-pošte na nbacc.dhs.gov
Adam L. BazinetSenior Bioinformatics Principal Investigator, NBACCPotvrđena adresa e-pošte na ST.DHS.GOV

Prati

Brian Ondov

Yale School of Medicine

Potvrđena adresa e-pošte na yale.edu - Početna stranica

Biomedical Informatics Computational Biology Large Language Models Human-Computer Interaction


Naslov Poredaj po navodima Poredaj po godini Poredaj po naslovu	Citirano Citirano	Godina
Mash: fast genome and metagenome distance estimation using MinHash BD Ondov, TJ Treangen, P Melsted, AB Mallonee, NH Bergman, S Koren, ... Genome Biology, 2016	2811	2016
Interactive metagenomic visualization in a Web browser BD Ondov, NH Bergman, AM Phillippy BMC bioinformatics 12, 1-10, 2011	2084	2011
The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes TJ Treangen, BD Ondov, S Koren, AM Phillippy Genome biology 15, 1-15, 2014	1624	2014
Structure and complexity of a bacterial transcriptome KD Passalacqua, A Varadarajan, BD Ondov, DT Okou, ME Zwick, ... Journal of bacteriology 191 (10), 3203-3211, 2009	274	2009
Mash Screen: high-throughput sequence containment estimation for genome discovery BD Ondov, GJ Starrett, A Sappington, A Kostic, S Koren, CB Buck, ... Genome biology 20, 1-13, 2019	258	2019
MetAMOS: a modular and open source metagenomic assembly and analysis pipeline TJ Treangen, S Koren, DD Sommer, B Liu, I Astrovskaya, B Ondov, ... Genome biology 14, 1-20, 2013	226	2013
Efficient mapping of Applied Biosystems SOLiD sequence data to a reference genome for functional genomic applications BD Ondov, A Varadarajan, KD Passalacqua, NH Bergman Bioinformatics 24 (23), 2776-2777, 2008	155	2008
Complete Genome Sequence of the Quality Control Strain Staphylococcus aureus subsp. aureus ATCC 25923 TJ Treangen, RA Maybank, S Enke, MB Friss, LF Diviak, DKR Karaolis, ... Genome announcements 2 (6), 10.1128/genomea. 01110-14, 2014	90	2014
Face to face: Evaluating visual comparison B Ondov, N Jardine, N Elmqvist, S Franconeri IEEE transactions on visualization and computer graphics 25 (1), 861-871, 2018	78	2018
The perceptual proxies of visual comparison N Jardine, BD Ondov, N Elmqvist, S Franconeri IEEE transactions on visualization and computer graphics 26 (1), 1012-1021, 2019	47	2019
Strand-Specific RNA-Seq Reveals Ordered Patterns of Sense and Antisense Transcription in Bacillus anthracis KD Passalacqua, A Varadarajan, C Weist, BD Ondov, B Byrd, TD Read, ... Public Library of Science 7 (8), e43350, 2012	45	2012
A survey of automated methods for biomedical text simplification B Ondov, K Attal, D Demner-Fushman Journal of the American Medical Informatics Association 29 (11), 1976-1988, 2022	42	2022
Psoralen inactivation of viruses: a process for the safe manipulation of viral antigen and nucleic acid K Schneider, L Wronka-Edwards, M Leggett-Embrey, E Walker, P Sun, ... Viruses 7 (11), 5875-5888, 2015	35	2015
An alignment algorithm for bisulfite sequencing using the Applied Biosystems SOLiD System BD Ondov, C Cochran, M Landers, GD Meredith, M Dudas, NH Bergman Bioinformatics 26 (15), 1901-1902, 2010	29	2010
BLAST-based validation of metagenomic sequence assignments AL Bazinet, BD Ondov, DD Sommer, S Ratnayake PeerJ 6, e4892, 2018	27	2018
Revealing perceptual proxies with adversarial examples BD Ondov, F Yang, M Kay, N Elmqvist, S Franconeri IEEE transactions on visualization and computer graphics 27 (2), 1073-1083, 2020	18	2020
A dataset for plain language adaptation of biomedical abstracts K Attal, B Ondov, D Demner-Fushman Scientific Data 10 (1), 8, 2023	17	2023
Current progress and future opportunities in applications of bioinformatics for biodefense and pathogen detection: report from the Winter Mid-Atlantic Microbiome Meet-up … JS Meisel, DJ Nasko, B Brubach, V Cepeda-Espinoza, J Chopyk, ... Microbiome 6, 1-10, 2018	12	2018
Genome sequence of the attenuated Carbosap vaccine strain of Bacillus anthracis R Harrington, BD Ondov, D Radune, MB Friss, J Klubnik, L Diviak, ... Genome announcements 1 (1), 10.1128/genomea. 00067-12, 2013	9	2013
Visualizing multilayer spatiotemporal epidemiological data with animated geocircles B Ondov, HB Patel, AT Kuo, J Kastner, Y Han, H Wei, N Elmqvist, H Samet Journal of the American Medical Informatics Association 31 (11), 2507-2518, 2024	1	2024

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