| miRTarBase 2020: updates to the experimentally validated microRNA–target interaction database HY Huang, YCD Lin, J Li, KY Huang, S Shrestha, HC Hong, Y Tang, ... Nucleic acids research 48 (D1), D148-D154, 2020 | 1353 | 2020 |
| miRTarBase update 2014: an information resource for experimentally validated miRNA-target interactions SD Hsu, YT Tseng, S Shrestha, YL Lin, A Khaleel, CH Chou, CF Chu, ... Nucleic acids research 42 (D1), D78-D85, 2014 | 816 | 2014 |
| miRTarBase update 2022: an informative resource for experimentally validated miRNA–target interactions HY Huang, YCD Lin, S Cui, Y Huang, Y Tang, J Xu, J Bao, Y Li, J Wen, ... Nucleic acids research 50 (D1), D222-D230, 2022 | 661 | 2022 |
| PlantPAN: Plant promoter analysis navigator, for identifying combinatorial cis-regulatory elements with distance constraint in plant gene groups WC Chang, TY Lee, HD Huang, HY Huang, RL Pan BMC genomics 9, 1-14, 2008 | 347 | 2008 |
| An enhanced computational platform for investigating the roles of regulatory RNA and for identifying functional RNA motifs TH Chang, HY Huang, JBK Hsu, SL Weng, JT Horng, HD Huang BMC bioinformatics 14, 1-8, 2013 | 335 | 2013 |
| MethHC: a database of DNA methylation and gene expression in human cancer WY Huang, SD Hsu, HY Huang, YM Sun, CH Chou, SL Weng, HD Huang Nucleic acids research 43 (D1), D856-D861, 2015 | 313 | 2015 |
| RegRNA: an integrated web server for identifying regulatory RNA motifs and elements HY Huang, CH Chien, KH Jen, HD Huang Nucleic acids research 34 (suppl_2), W429-W434, 2006 | 278 | 2006 |
| dbPTM: an information repository of protein post-translational modification TY Lee, HD Huang, JH Hung, HY Huang, YS Yang, TH Wang Nucleic acids research 34 (suppl_1), D622-D627, 2006 | 268 | 2006 |
| AMP-activated protein kinase phosphorylation of angiotensin-converting enzyme 2 in endothelium mitigates pulmonary hypertension J Zhang, J Dong, M Martin, M He, B Gongol, TL Marin, L Chen, X Shi, ... American journal of respiratory and critical care medicine 198 (4), 509-520, 2018 | 199 | 2018 |
| A systematic review of microRNA expression profiling studies in human gastric cancer S Shrestha, SD Hsu, WY Huang, HY Huang, WL Chen, SL Weng, ... Cancer medicine 3 (4), 878-888, 2014 | 165 | 2014 |
| sRNAMap: genomic maps for small non-coding RNAs, their regulators and their targets in microbial genomes HY Huang, HY Chang, CH Chou, CP Tseng, SY Ho, CD Yang, YW Ju, ... Nucleic acids research 37 (suppl_1), D150-D154, 2009 | 109 | 2009 |
| Krüppel-like factor 4 regulation of cholesterol-25-hydroxylase and liver X receptor mitigates atherosclerosis susceptibility Z Li, M Martin, J Zhang, HY Huang, L Bai, J Zhang, J Kang, M He, J Li, ... Circulation 136 (14), 1315-1330, 2017 | 104 | 2017 |
| CRP represses the CRISPR/Cas system in Escherichia coli: evidence that endogenous CRISPR spacers impede phage P1 replication CD Yang, YH Chen, HY Huang, HD Huang, CP Tseng Molecular Microbiology 92 (5), 1072-1091, 2014 | 72 | 2014 |
| YjcC, a c-di-GMP phosphodiesterase protein, regulates the oxidative stress response and virulence of Klebsiella pneumoniae CG43 CJ Huang, ZC Wang, HY Huang, HD Huang, HL Peng PLoS One 8 (7), e66740, 2013 | 71 | 2013 |
| Differential cell-intrinsic regulations of germinal center B and T cells by miR-146a and miR-146b S Cho, HM Lee, IS Yu, YS Choi, HY Huang, SS Hashemifar, LL Lin, ... Nature communications 9 (1), 2757, 2018 | 69 | 2018 |
| Atheroprotective flow upregulates ITPR3 (inositol 1, 4, 5-trisphosphate receptor 3) in vascular endothelium via KLF4 (Krüppel-like factor 4)-mediated histone modifications M He, TS Huang, S Li, HC Hong, Z Chen, M Martin, X Zhou, HY Huang, ... Arteriosclerosis, thrombosis, and vascular biology 39 (5), 902-914, 2019 | 58 | 2019 |
| DNA-sensing and nuclease gene expressions as markers for colorectal cancer progression CA Yang, HY Huang, YS Chang, CL Lin, IL Lai, JG Chang Oncology 92 (2), 115-124, 2017 | 55 | 2017 |
| A novel role of CPEB3 in regulating EGFR gene transcription via association with Stat5b in neurons SC Peng, YT Lai, HY Huang, HD Huang, YS Huang Nucleic acids research 38 (21), 7446-7457, 2010 | 52 | 2010 |
| CircNet 2.0: an updated database for exploring circular RNA regulatory networks in cancers Y Chen, L Yao, Y Tang, JH Jhong, J Wan, J Chang, S Cui, Y Luo, X Cai, ... Nucleic acids research 50 (D1), D93-D101, 2022 | 49 | 2022 |
| Enzyme activity of natural products on cytochrome P450 HL Zuo, HY Huang, YCD Lin, XX Cai, XJ Kong, DL Luo, YH Zhou, ... Molecules 27 (2), 515, 2022 | 38 | 2022 |
