| 18.9-Pflops nonlinear earthquake simulation on Sunway TaihuLight: enabling depiction of 18-Hz and 8-meter scenarios H Fu, C He, B Chen, Z Yin, Z Zhang, W Zhang, T Zhang, W Xue, W Liu, ... Proceedings of the International Conference for High Performance Computing …, 2017 | 147 | 2017 |
| Computing platforms for big biological data analytics: perspectives and challenges Z Yin, H Lan, G Tan, M Lu, AV Vasilakos, W Liu Computational and structural biotechnology journal 15, 403-411, 2017 | 84 | 2017 |
| RabbitQC: high-speed scalable quality control for sequencing data Z Yin, H Zhang, M Liu, W Zhang, H Song, H Lan, Y Wei, B Niu, B Schmidt, ... Bioinformatics 37 (4), 573-574, 2021 | 15 | 2021 |
| Efficient parallel sort on avx-512-based multi-core and many-core architectures Z Yin, T Zhang, A Müller, H Liu, Y Wei, B Schmidt, W Liu 2019 IEEE 21st international conference on high performance computing and …, 2019 | 14 | 2019 |
| 69.7-PFlops Extreme Scale Earthquake Simulation with Crossing Multi-faults and Topography on Sunway W Wan, L Gan, W Wang, Z Yin, H Tian, Z Zhang, Y Wang, M Hua, X Liu, ... Proceedings of the International Conference for High Performance Computing …, 2023 | 10 | 2023 |
| SLPal: Accelerating long sequence alignment on many-core and multi-core architectures X Xu, Y Chan, K Xu, J Zhang, X Wang, Z Yin, W Liu 2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2020 | 8 | 2020 |
| Rabbitfx: efficient framework for fasta/q file parsing on modern multi-core platforms H Zhang, H Song, X Xu, Q Chang, M Wang, Y Wei, Z Yin, B Schmidt, ... IEEE/ACM Transactions on Computational Biology and Bioinformatics 20 (3 …, 2022 | 7 | 2022 |
| RabbitTClust: enabling fast clustering analysis of millions of bacteria genomes with MinHash sketches X Xu, Z Yin, L Yan, H Zhang, B Xu, Y Wei, B Niu, B Schmidt, W Liu Genome Biology 24 (1), 121, 2023 | 6 | 2023 |
| RabbitMash: accelerating hash-based genome analysis on modern multi-core architectures Z Yin, X Xu, J Zhang, Y Wei, B Schmidt, W Liu Bioinformatics 37 (6), 873-875, 2021 | 6 | 2021 |
| Dgcf: A distributed greedy clustering framework for large-scale genomic sequences Z Yin, X Xu, K Fan, R Li, W Li, W Liu, B Niu 2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2019 | 4 | 2019 |
| RabbitQCPlus 2.0: More efficient and versatile quality control for sequencing data L Yan, Z Yin, H Zhang, Z Zhao, M Wang, A Müller, F Kallenborn, ... Methods 216, 39-50, 2023 | 2 | 2023 |
| RabbitQCPlus: more efficient quality control for sequencing data L Yan, Z Yin, H Zhang, Z Zhao, M Wang, A Müller, R Kobus, Y Wei, B Niu, ... 2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2022 | 2 | 2022 |
| Refactoring BZIP2 on the new‐generation sunway supercomputer X Liu, Z Yin, H Tian, W Wan, M Hua, W Zhao, Z Huang, P Gao, F Zhu, ... Engineering Reports 7 (1), e12806, 2025 | 1 | 2025 |
| Fastattention: Extend flashattention2 to npus and low-resource gpus H Lin, X Yu, K Zhao, L Hou, Z Zhan, S Kamenev, H Bao, T Hu, M Wang, ... arXiv preprint arXiv:2410.16663, 2024 | 1 | 2024 |
| O2ath: an OpenMP offloading toolkit for the sunway heterogeneous manycore platform H Lin, L Yan, Q Chang, H Lu, C Li, Q He, Z Song, X Duan, Z Yin, Y Li, ... CCF Transactions on High Performance Computing 6 (3), 274-286, 2024 | 1 | 2024 |
| RabbitKSSD: accelerating genome distance estimation on modern multi-core architectures X Xu, Z Yin, L Yan, H Yi, H Wang, B Schmidt, W Liu Bioinformatics 39 (11), btad695, 2023 | 1 | 2023 |
| DeepFilter: A Deep Learning Based Variant Filter for VarDict H Zhang, Z Yin, Y Wei, B Schmidt, W Liu Tsinghua Science and Technology 28 (4), 665-672, 2023 | 1 | 2023 |
| RabbitV: fast detection of viruses and microorganisms in sequencing data on multi-core architectures H Zhang, Q Chang, Z Yin, X Xu, Y Wei, B Schmidt, W Liu Bioinformatics 38 (10), 2932-2933, 2022 | 1 | 2022 |
| Xlcs: A new bit-parallel longest common subsequence algorithm on xeon phi clusters Z Yin, H Zhang, K Xu, Y Chan, S Peng, X Wang, B Schmidt, W Liu 2019 IEEE 21st International Conference on High Performance Computing and …, 2019 | 1 | 2019 |
| SWQC: Efficient sequencing data quality control on the next-generation sunway platform L Yan, Z Yin, T Zhang, F Zhu, X Duan, B Schmidt, W Liu Future Generation Computer Systems 164, 107577, 2025 | | 2025 |
Yanjie WeiShenzhen Institutes of Advanced Technology, Chinese Academy of SciencesPotvrđena adresa e-pošte na siat.ac.cn
