Prati
Jason D. Lieb
Jason D. Lieb
Independent
Potvrđena adresa e-pošte na berkeley.edu - Početna stranica
Naslov
Citirano
Citirano
Godina
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
174852012
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
61342007
The accessible chromatin landscape of the human genome
RE Thurman, E Rynes, R Humbert, J Vierstra, MT Maurano, E Haugen, ...
Nature 489 (7414), 75-82, 2012
32052012
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
SG Landt, GK Marinov, A Kundaje, P Kheradpour, F Pauli, S Batzoglou, ...
Genome research 22 (9), 1813-1831, 2012
23492012
The DNA-encoded nucleosome organization of a eukaryotic genome
N Kaplan, IK Moore, Y Fondufe-Mittendorf, AJ Gossett, D Tillo, Y Field, ...
Nature 458 (7236), 362-366, 2009
14632009
FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin
PG Giresi, J Kim, RM McDaniell, VR Iyer, JD Lieb
Genome research 17 (6), 877-885, 2007
11952007
Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project
MB Gerstein, ZJ Lu, EL Van Nostrand, C Cheng, BI Arshinoff, T Liu, ...
Science 330 (6012), 1775-1787, 2010
11542010
Unlocking the secrets of the genome
SE Celniker, LAL Dillon, MB Gerstein, KC Gunsalus, S Henikoff, ...
Nature 459 (7249), 927-930, 2009
9772009
Promoter-specific binding of Rap1 revealed by genome-wide maps of protein–DNA association
JD Lieb, X Liu, D Botstein, PO Brown
Nature genetics 28 (4), 327-334, 2001
9412001
Evidence for nucleosome depletion at active regulatory regions genome-wide
CK Lee, Y Shibata, B Rao, BD Strahl, JD Lieb
Nature genetics 36 (8), 900-905, 2004
9382004
Defining functional DNA elements in the human genome
M Kellis, B Wold, MP Snyder, BE Bernstein, A Kundaje, GK Marinov, ...
Proceedings of the National Academy of Sciences 111 (17), 6131-6138, 2014
9012014
ChIP-chip: considerations for the design, analysis, and application of genome-wide chromatin immunoprecipitation experiments
MJ Buck, JD Lieb
Genomics 83 (3), 349-360, 2004
8512004
What are super-enhancers?
S Pott, JD Lieb
Nature genetics 47 (1), 8-12, 2015
8322015
A user's guide to the encyclopedia of DNA elements (ENCODE)
RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ...
PLoS biology 9 (4), 2011
6882011
A map of open chromatin in human pancreatic islets
KJ Gaulton, T Nammo, L Pasquali, JM Simon, PG Giresi, MP Fogarty, ...
Nature genetics 42 (3), 255-259, 2010
6582010
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity
L Song, Z Zhang, LL Grasfeder, AP Boyle, PG Giresi, BK Lee, ...
Genome research 21 (10), 1757-1767, 2011
6452011
Nucleosome dynamics define transcriptional enhancers
HH He, CA Meyer, H Shin, ST Bailey, G Wei, Q Wang, Y Zhang, K Xu, ...
Nature genetics 42 (4), 343-347, 2010
5652010
A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters
G Badis, ET Chan, H van Bakel, L Pena-Castillo, D Tillo, K Tsui, ...
Molecular cell 32 (6), 878-887, 2008
5382008
An assessment of histone-modification antibody quality
TA Egelhofer, A Minoda, S Klugman, K Lee, P Kolasinska-Zwierz, ...
Nature structural & molecular biology 18 (1), 91-93, 2011
4962011
Genome-Wide Association Study in Asian Populations Identifies Variants in ETS1 and WDFY4 Associated with Systemic Lupus Erythematosus
W Yang, N Shen, DQ Ye, Q Liu, Y Zhang, XX Qian, N Hirankarn, D Ying, ...
PLoS genetics 6 (2), e1000841, 2010
4682010
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