Kathryn Holt

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Ryan WickUniversity of MelbournePotvrđena adresa e-pošte na unimelb.edu.au
Kelly L. WyresMonash UniversityPotvrđena adresa e-pošte na monash.edu
Stephen BakerUniversity of CambridgePotvrđena adresa e-pošte na medschl.cam.ac.uk
Michael InouyeProfessor of Systems Genomics & Population Health, University of Cambridge; Baker InstitutePotvrđena adresa e-pošte na medschl.cam.ac.uk
François-Xavier WeillProfessor, Institut Pasteur, Paris, FrancePotvrđena adresa e-pošte na pasteur.fr
John WainQuadram Institute BiosciencesPotvrđena adresa e-pošte na jidc.org
Justin ZobelComputing and Information Systems, University of MelbournePotvrđena adresa e-pošte na unimelb.edu.au
Robert A KingsleyGroup Leader at the Quadram Institute Bioscience, UKPotvrđena adresa e-pošte na quadram.ac.uk
Abhilasha KarkeyOxford University Clinical Research UnitPotvrđena adresa e-pošte na oucru.org
Mark Achtman FRSemeritus Professor University of Warwick, previously University College Cork and Max-PlanckPotvrđena adresa e-pošte na warwick.ac.uk
Sarah DunstanPeter Doherty Institute for Infection and Immunity, The University of MelbournePotvrđena adresa e-pošte na unimelb.edu.au
Stephen BentleyWellcome Sanger InstitutePotvrđena adresa e-pošte na sanger.ac.uk
Simon R. HarrisSenior Program Officer, Bill & Melinda Gates FoundationPotvrđena adresa e-pošte na sanger.ac.uk
Tim StinearProfessor, University of MelbournePotvrđena adresa e-pošte na unimelb.edu.au
Edward C HolmesUniversity of SydneyPotvrđena adresa e-pošte na sydney.edu.au
Minh-Duy PhanThe University of QueenslandPotvrđena adresa e-pošte na uq.edu.au
Ian GoodheadUniversity of SalfordPotvrđena adresa e-pošte na salford.ac.uk
Sebastien GagneuxSwiss Tropical and Public Health InstitutePotvrđena adresa e-pošte na swisstph.ch
Trevor D LawleyWellcome Trust Sanger InstitutePotvrđena adresa e-pošte na sanger.ac.uk
William HanageHarvard T H Chan School of Public HealthPotvrđena adresa e-pošte na hsph.harvard.edu

Prati

Kathryn Holt

LSHTM & Monash University

Potvrđena adresa e-pošte na lshtm.ac.uk - Početna stranica

microbial genomics & infection


Naslov Poredaj po navodima Poredaj po godini Poredaj po naslovu	Citirano Citirano	Godina
Unicycler: resolving bacterial genome assemblies from short and long sequencing reads RR Wick, LM Judd, CL Gorrie, KE Holt PLOS Computational Biology 13 (6), e1005595, 2017	6530	2017
Bandage: interactive visualization of de novo genome assemblies RR Wick, MB Schultz, J Zobel, KE Holt Bioinformatics 31 (20), 3350-2, 2015	2204	2015
Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans I Comas, M Coscolla, T Luo, S Borrell, KE Holt, M Kato-Maeda, J Parkhill, ... Nature genetics 45 (10), 1176-1182, 2013	1352	2013
Performance of neural network basecalling tools for Oxford Nanopore sequencing RR Wick, LM Judd, KE Holt Genome Biology 20 (1), 129, 2019	1304	2019
Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health KE Holt, H Wertheim, RN Zadoks, S Baker, CA Whitehouse, D Dance, ... Proceedings of the National Academy of Sciences 112 (27), E3574-E3581, 2015	1289	2015
SRST2: Rapid genomic surveillance for public health and hospital microbiology labs M Inouye, H Dashnow, LA Raven, MB Schultz, BJ Pope, T Tomita, J Zobel, ... Genome Medicine 6 (11), 1-16, 2014	1044	2014
The Infant Nasopharyngeal Microbiome Impacts Severity of Lower Respiratory Infection and Risk of Asthma Development SM Teo, D Mok, K Pham, M Kusel, M Serralha, N Troy, BJ Holt, BJ Hales, ... Cell Host and Microbe 17 (5), 704-715, 2015	999	2015
Completing bacterial genome assemblies with multiplex MinION sequencing RR Wick, LM Judd, CL Gorrie, KE Holt Microbial Genomics, 2017	854	2017
Population genomics of Klebsiella pneumoniae KL Wyres, MMC Lam, KE Holt Nature Reviews Microbiology 18 (6), 344-359, 2020	829	2020
Epidemic multiple drug resistant Salmonella Typhimurium causing invasive disease in sub-Saharan Africa have a distinct genotype RA Kingsley, CL Msefula, NR Thomson, S Kariuki, KE Holt, MA Gordon, ... Genome research 19 (12), 2279-2287, 2009	647	2009
A genomic surveillance framework and genotyping tool for Klebsiella pneumoniae and its related species complex MMC Lam, RR Wick, SC Watts, LT Cerdeira, KL Wyres, KE Holt Nature communications 12 (1), 4188, 2021	618	2021
High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi KE Holt, J Parkhill, CJ Mazzoni, P Roumagnac, FX Weill, I Goodhead, ... Nature genetics 40 (8), 987-993, 2008	590	2008
Klebsiella pneumoniae as a key trafficker of drug resistance genes from environmental to clinically important bacteria KL Wyres, KE Holt Current opinion in microbiology 45, 131-139, 2018	588	2018
Gastrointestinal carriage is a major reservoir of Klebsiella pneumoniae infection in intensive care patients CL Gorrie, M Mirčeta, RR Wick, DJ Edwards, NR Thomson, RA Strugnell, ... Clinical Infectious Diseases 65 (2), 208-215, 2017	535	2017
Identification of Klebsiella capsule synthesis loci from whole genome data K Wyres, RR Wick, C Gorrie, A Jenney, R Follador, NR Thomson, KE Holt bioRxiv, 071415, 2016	506	2016
Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter-and intracontinental transmission events VK Wong, S Baker, DJ Pickard, J Parkhill, AJ Page, NA Feasey, ... Nature Genetics 47 (6), 632-639, 2015	505	2015
Open-source genomic analysis of Shiga-toxin-producing E. coli O104:H4 New England Journal of Medicine 365 (8), 718-724, 2011	503	2011
Evolutionary dynamics of Clostridium difficile over short and long time scales M He, M Sebaihia, TD Lawley, RA Stabler, LF Dawson, MJ Martin, KE Holt, ... Proceedings of the National Academy of Sciences 107 (16), 7527, 2010	438	2010
Polypolish: short-read polishing of long-read bacterial genome assemblies RR Wick, KE Holt PLOS Computational Biology 18 (1), e1009802, 2022	379	2022
Genomic insights into the emergence and spread of antimicrobial-resistant bacterial pathogens S Baker, N Thomson, FX Weill, KE Holt Science 360 (6390), 733-738, 2018	358	2018

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