Prati
Derek Bickhart
Derek Bickhart
Research Geneticist, USDA ARS
Potvrđena adresa e-pošte na ars.usda.gov
Naslov
Citirano
Citirano
Godina
metaFlye: scalable long-read metagenome assembly using repeat graphs
M Kolmogorov, DM Bickhart, B Behsaz, A Gurevich, M Rayko, SB Shin, ...
Nature Methods 17 (11), 1103-1110, 2020
6942020
Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome
DM Bickhart, BD Rosen, S Koren, BL Sayre, AR Hastie, S Chan, J Lee, ...
Nature genetics 49 (4), 643-650, 2017
6152017
De novo assembly of the cattle reference genome with single-molecule sequencing
BD Rosen, DM Bickhart, RD Schnabel, S Koren, CG Elsik, E Tseng, ...
Gigascience 9 (3), giaa021, 2020
5222020
De novo assembly of haplotype-resolved genomes with trio binning
S Koren, A Rhie, BP Walenz, AT Dilthey, DM Bickhart, SB Kingan, ...
Nature biotechnology 36 (12), 1174-1182, 2018
4652018
Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography
P Normand, P Lapierre, LS Tisa, JP Gogarten, N Alloisio, E Bagnarol, ...
Genome research 17 (1), 7-15, 2007
4352007
Copy number variation of individual cattle genomes using next-generation sequencing
DM Bickhart, Y Hou, SG Schroeder, C Alkan, MF Cardone, ...
Genome research 22 (4), 778-790, 2012
3572012
An improved pig reference genome sequence to enable pig genetics and genomics research
A Warr, N Affara, B Aken, H Beiki, DM Bickhart, K Billis, W Chow, L Eory, ...
Gigascience 9 (6), giaa051, 2020
2612020
Scaffolding of long read assemblies using long range contact information
J Ghurye, M Pop, S Koren, D Bickhart, CS Chin
BMC genomics 18, 1-11, 2017
2612017
Genomic characteristics of cattle copy number variations
Y Hou, GE Liu, DM Bickhart, MF Cardone, K Wang, E Kim, LK Matukumalli, ...
BMC genomics 12, 1-11, 2011
2542011
On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales
O Zhaxybayeva, KS Swithers, P Lapierre, GP Fournier, DM Bickhart, ...
Proceedings of the National Academy of Sciences 106 (14), 5865-5870, 2009
2442009
Cattle sex-specific recombination and genetic control from a large pedigree analysis
L Ma, JR O'Connell, PM VanRaden, B Shen, A Padhi, C Sun, DM Bickhart, ...
PLoS genetics 11 (11), e1005387, 2015
2092015
Genomic signatures reveal new evidences for selection of important traits in domestic cattle
L Xu, DM Bickhart, JB Cole, SG Schroeder, J Song, CPV Tassell, ...
Molecular biology and evolution 32 (3), 711-725, 2015
1732015
Genome to phenome: improving animal health, production, and well-being–a new USDA blueprint for animal genome research 2018–2027
C Rexroad, J Vallet, LK Matukumalli, J Reecy, D Bickhart, H Blackburn, ...
Frontiers in genetics 10, 327, 2019
1692019
Selecting sequence variants to improve genomic predictions for dairy cattle
PM VanRaden, ME Tooker, JR O’connell, JB Cole, DM Bickhart
Genetics Selection Evolution 49, 1-12, 2017
1652017
Generating lineage-resolved, complete metagenome-assembled genomes from complex microbial communities
DM Bickhart, M Kolmogorov, E Tseng, DM Portik, A Korobeynikov, ...
Nature biotechnology 40 (5), 711-719, 2022
1562022
Genomic divergence of zebu and taurine cattle identified through high-density SNP genotyping
LR Porto-Neto, TS Sonstegard, GE Liu, DM Bickhart, MVB Da Silva, ...
BMC genomics 14, 1-12, 2013
1542013
Chromosome-level assembly of the water buffalo genome surpasses human and goat genomes in sequence contiguity
WY Low, R Tearle, DM Bickhart, BD Rosen, SB Kingan, T Swale, ...
Nature communications 10 (1), 260, 2019
1482019
The challenges and importance of structural variation detection in livestock
DM Bickhart, GE Liu
Frontiers in genetics 5, 37, 2014
1462014
Identification of a nonsense mutation in CWC15 associated with decreased reproductive efficiency in Jersey cattle
TS Sonstegard, JB Cole, PM VanRaden, CP Van Tassell, DJ Null, ...
PloS one 8 (1), e54872, 2013
1352013
Genomic regions showing copy number variations associate with resistance or susceptibility to gastrointestinal nematodes in Angus cattle
Y Hou, GE Liu, DM Bickhart, LK Matukumalli, C Li, J Song, LC Gasbarre, ...
Functional & integrative genomics 12, 81-92, 2012
1262012
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