CABS-dock web server for the flexible docking of peptides to proteins without prior knowledge of the binding site M Kurcinski, M Jamroz, M Blaszczyk, A Kolinski, S Kmiecik Nucleic acids research 43 (W1), W419-W424, 2015 | 400 | 2015 |
Modeling of protein-peptide interactions using the CABS-dock web server for binding site search and flexible docking M Blaszczyk, M Kurcinski, M Kouza, L Wieteska, A Debinski, M Jamroz, ... Methods, 72–83, 2016 | 179 | 2016 |
CABS-fold: server for the de novo and consensus-based prediction of protein structure M Blaszczyk, M Jamroz, S Kmiecik, A Kolinski Nucleic acids research 41 (W1), W406-W411, 2013 | 112 | 2013 |
Optimization of protein models D Gront, S Kmiecik, M Blaszczyk, D Ekonomiuk, A Koliński Wiley Interdisciplinary Reviews: Computational Molecular Science 2 (3), 479-493, 2012 | 41 | 2012 |
Protein–peptide docking using CABS-dock and contact information M Blaszczyk, MP Ciemny, A Kolinski, M Kurcinski, S Kmiecik Briefings in bioinformatics, 2018 | 40 | 2018 |
BioShell Threader: protein homology detection based on sequence profiles and secondary structure profiles D Gront, M Blaszczyk, P Wojciechowski, A Kolinski Nucleic acids research 40 (W1), W257-W262, 2012 | 21 | 2012 |
Modeling EphB4-EphrinB2 protein–protein interaction using flexible docking of a short linear motif MP Ciemny, M Kurcinski, M Blaszczyk, A Kolinski, S Kmiecik Biomedical engineering online 16 (1), 71, 2017 | 15 | 2017 |
A protocol for CABS-dock protein–peptide docking driven by side-chain contact information M Kurcinski, M Blaszczyk, MP Ciemny, A Kolinski, S Kmiecik Biomedical engineering online 16 (1), 73, 2017 | 12 | 2017 |
Coarse-Grained Protein Models in Structure Prediction M Blaszczyk, D Gront, S Kmiecik, K Ziolkowska, M Panek, A Kolinski Computational Methods to Study the Structure and Dynamics of Biomolecules …, 2014 | 6 | 2014 |
Protein Structure Prediction Using Coarse-Grained Models M Blaszczyk, D Gront, S Kmiecik, M Kurcinski, M Kolinski, MP Ciemny, ... Computational Methods to Study the Structure and Dynamics of Biomolecules …, 2019 | 4 | 2019 |
Flexible protein-peptide docking using CABS-dock with knowledge about the binding site M Kurcinski, MP Ciemny, M Blaszczyk, A Kolinski, S Kmiecik arXiv preprint arXiv:1605.09269, 2016 | 1 | 2016 |
Protein-Peptide Docking with High Conformational Flexibility using CABS-dock Web Tool M Kouza, M Blaszczyk, M Kurcinski, L Wieteska, A Debinski, A Kolinski, ... Biophysical Journal 110 (3), 543a, 2016 | 1 | 2016 |
CABS-dock web server for protein-peptide docking with significant conformational changes and without prior knowledge of the binding site: PJ-022 M Kurcinski, M Jamroz, M Blaszczyk, A Kolinski, S Kmiecik Protein Science 24, 2015 | 1 | 2015 |
web server tools for modeling of protein structure, flexibility, aggregation properties and protein-peptide interactions: Pj-023 M Blaszczyk, M Jamroz, M Kurcinski, A Szczasiuk, A Kolinski, S Kmiecik Protein Science 24, 247-248, 2015 | | 2015 |
Coarse-grained modeling of protein structure, dynamics and protein-protein interactions A Koliński, S Kmiecik, M Jamroz, M Blaszczyk, M Kouza, M Kurcinski TASK Quarterly 18, 2014 | | 2014 |
Modeling Protein Structures and their Complexes with Sparse Experimental Data D Gront, M Błaszczyk, J Wabik, A Kolinski From Computational Biophysics to Systems Biology (CBSB11)–Celebrating Harold …, 2012 | | 2012 |
Coarse-grained Protein Modeling: Dynamics, Folding Pathways and Mechanical Unfolding A Kolinski, M Blaszczyk, S Kmiecik From Computational Biophysics to Systems Biology (CBSB11)–Celebrating Harold …, 2012 | | 2012 |
Protein Structure Prediction Using CABS–A Consensus Approach M Blaszczyk, M Jamroz, D Gront, A Kolinski From Computational Biophysics to Systems Biology (CBSB11)–Celebrating Harold …, 2012 | | 2012 |
Prediction of Experimental Phi Values in Protein Folding by Simulation with Knowledge-based Potentials: B Domain of Protein A S Kmiecik, M Blaszczyk, A Kolinski From Computational Biophysics to Systems Biology (CBSB11)–Celebrating Harold …, 2012 | | 2012 |