| Cell segmentation in imaging-based spatial transcriptomics V Petukhov, RJ Xu, RA Soldatov, P Cadinu, K Khodosevich, JR Moffitt, ... Nature biotechnology 40 (3), 345-354, 2022 | 242 | 2022 |
| A direct, quantitative connection between molecular dynamics simulations and vibrational probe line shapes RJ Xu, B Blasiak, M Cho, JP Layfield, CH Londergan The journal of physical chemistry letters 9 (10), 2560-2567, 2018 | 35 | 2018 |
| Charting the cellular biogeography in colitis reveals fibroblast trajectories and coordinated spatial remodeling P Cadinu, KN Sivanathan, A Misra, RJ Xu, D Mangani, E Yang, JM Rone, ... Cell 187 (8), 2010-2028. e30, 2024 | 30 | 2024 |
| Cyanylated cysteine reports site-specific changes at protein–protein-binding interfaces without perturbation SR Dalton, AR Vienneau, SR Burstein, RJ Xu, S Linse, CH Londergan Biochemistry 57 (26), 3702-3712, 2018 | 25 | 2018 |
| Conformational ensembles of calmodulin revealed by nonperturbing site-specific vibrational probe groups KL Kelly, SR Dalton, RB Wai, K Ramchandani, RJ Xu, S Linse, ... The Journal of Physical Chemistry A 122 (11), 2947-2955, 2018 | 21 | 2018 |
| Understanding structural adaptability: a reactant informatics approach to experiment design RJ Xu, JH Olshansky, PDF Adler, Y Huang, MD Smith, M Zeller, J Schrier, ... Molecular Systems Design & Engineering 3 (3), 473-484, 2018 | 14 | 2018 |
| Probing structural adaptability in templated vanadium selenites PDF Adler, R Xu, JH Olshansky, MD Smith, KC Elbert, Y Yang, ... Polyhedron 114, 184-193, 2016 | 11 | 2016 |
| Accurate single-molecule spot detection for image-based spatial transcriptomics with weakly supervised deep learning E Laubscher, X Wang, N Razin, T Dougherty, RJ Xu, L Ombelets, E Pao, ... Cell Systems 15 (5), 475-482. e6, 2024 | 9 | 2024 |
| A measurement of the photoionization cross section of CH2Cl via photofragment translational spectroscopy of dichloromethane PG Scrape, RJ Xu, JD Adams, SH Lee, LJ Butler Chemical Physics Letters 687, 284-289, 2017 | 2 | 2017 |
| Identifying spatially variable genes by projecting to morphologically relevant curves PB Nicol, R Ma, RJ Xu, JR Moffitt, RA Irizarry bioRxiv, 2024.11. 21.624653, 2024 | | 2024 |
| Refining conformational ensembles using vibrational probe group data and frequency simulations C Londergan, R Xu, CH Fu ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 257, 2019 | | 2019 |
| Computational Simulations of the NTAIL-XD Complex from the Nipah Virus for Constructing Experimentally-Validated Structural Ensemble CH Fu, CH Londergan, RJ Xu Biophysical Journal 116 (3), 200a, 2019 | | 2019 |
| Relating the Vibrational Lineshapes of the Thiocyanate (SCN) Probe to Structures and Dynamics in Calmodulin Ensembles via Computational Approaches RJ Xu, SR Dalton, KL Kelly, CH Londergan Biophysical Journal 114 (3), 68a, 2018 | | 2018 |
| Cyanylated cysteine as an infrared reporter of protein-peptide interactions: Experimental measurements, molecular dynamics simulations and semi-quantitative calculations of IR … R Xu, C Londergan ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 254, 2017 | | 2017 |
| Probing structural adaptability in templated vanadium selenites R Xu, A Norquist Abstracts of Papers of the American Chemical Society 252, 2016 | | 2016 |
| Using computer generated decision trees to understand structural adaptivity in [V3O5 (SeO3) 3] 2n-n layered compounds P Adler, A Norquist, R Xu ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 251, 2016 | | 2016 |
| Electronic supplementary information for Understanding structural adaptability: a reactant informatics approach to experiment design RJ Xu, JH Olshansky, PDF Adler, Y Huang, MD Smith, M Zeller, J Schrier, ... | | |
