Anna Gerasimova,PhD

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Suautori

Ivan AdzhubeiHarvard Medical School, Dept of Bioimedical Informatics (DBMI)Potvrđena adresa e-pošte na hms.harvard.edu
Peer BorkDirector of EMBL HeidelbergPotvrđena adresa e-pošte na embl.de
Steffen SchmidtUniversity of BayreuthPotvrđena adresa e-pošte na uni-bayreuth.de
Leonid PeshkinHarvard Medical SchoolPotvrđena adresa e-pošte na hms.harvard.edu
Shamil SunyaevProfessor of Biomedical Informatics and of Medicine (BWH), Harvard Medical SchoolPotvrđena adresa e-pošte na rics.bwh.harvard.edu
Vasily RamenskyNational Medical Research Center for Preventive Medicine, Moscow, RussiaPotvrđena adresa e-pošte na gnicpm.ru
Mikhail GelfandVice-President for Biomedical Research, SkoltechPotvrđena adresa e-pošte na skoltech.ru
Bjoern PetersProfessor at La Jolla Institute for ImmunologyPotvrđena adresa e-pošte na lji.org
Gregory SeumoisAssociate Professor, San Diego BioMed Research InstitutePotvrđena adresa e-pošte na sdbri.org
Pandurangan VijayanandProfessor, La Jolla Institute for ImmunologyPotvrđena adresa e-pošte na lji.org
Andrey MironovMoscow State University, dept Bioengineering and BioinformaticsPotvrđena adresa e-pošte na bioinf.fbb.msu.ru
Anjana RaoHarvard Medical SchoolPotvrđena adresa e-pošte na lji.org
Lukas ChavezAssociate Professor, Department of Medicine, University of California, San Diego (UCSD)Potvrđena adresa e-pošte na ucsd.edu
Cecilia Lindestam ArlehamnLa Jolla Institute for Allergy and ImmunologyPotvrđena adresa e-pošte na liai.org
Dmitry RavcheevMRM HealthPotvrđena adresa e-pošte na nuigalway.ie
Alessandro SettePotvrđena adresa e-pošte na liai.org
Vsevolod MakeevCancer Research UK, ManchesterPotvrđena adresa e-pošte na manchester.ac.uk
Alexander Favorovresearch associate@oncbiostat.jhu.edu; senior fellow reasearcher@vigg.ruPotvrđena adresa e-pošte na sensi.org
Inna DubchakSenior Scientist, Lawrence Berkeley National Laboratory, USAPotvrđena adresa e-pošte na lbl.gov
Adam Paul ArkinDepartment of Bioengineering, University of California, Berkeley, Physical Biosciences Division, E.OPotvrđena adresa e-pošte na lbl.gov

Prati

Anna Gerasimova,PhD

Associate Director of Bioinformatics, Quest Diagnostics

Potvrđena adresa e-pošte na questdiagnostics.com

Assay development NGS analysis Data analysis


Naslov Poredaj po navodima Poredaj po godini Poredaj po naslovu	Citirano Citirano	Godina
A method and server for predicting damaging missense mutations IA Adzhubei, S Schmidt, L Peshkin, VE Ramensky, A Gerasimova, P Bork, ... Nature methods 7 (4), 248-249, 2010	14750	2010
Deinococcus geothermalis: The Pool of Extreme Radiation Resistance Genes Shrinks KS Makarova, MV Omelchenko, EK Gaidamakova, VY Matrosova, ... PloS one 2 (9), e955, 2007	298	2007
Memory T Cells in Latent Mycobacterium tuberculosis Infection Are Directed against Three Antigenic Islands and Largely Contained in a CXCR3+ CCR6+ Th1 Subset CSL Arlehamn, A Gerasimova, F Mele, R Henderson, J Swann, ... PLoS Pathogens 9 (1), e1003130, 2013	264	2013
Epigenomic analysis of primary human T cells reveals enhancers associated with T_H2 memory cell differentiation and asthma susceptibility G Seumois, L Chavez, A Gerasimova, M Lienhard, N Omran, L Kalinke, ... Nature immunology 15 (8), 777-788, 2014	214	2014
A Gibbs sampler for identification of symmetrically structured, spaced DNA motifs with improved estimation of the signal length AV Favorov, MS Gelfand, AV Gerasimova, DA Ravcheev, AA Mironov, ... Bioinformatics 21 (10), 2240-2245, 2005	189	2005
Transcriptional profile of tuberculosis antigen–specific T cells reveals novel multifunctional features CL Arlehamn, G Seumois, A Gerasimova, C Huang, Z Fu, X Yue, A Sette, ... The Journal of Immunology 193 (6), 2931-2940, 2014	111	2014
Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus DA Rodionov, PS Novichkov, ED Stavrovskaya, IA Rodionova, X Li, ... BMC genomics 12, 1-17, 2011	81	2011
Comparative genomic analysis of regulation of anaerobic respiration in ten genomes from three families of gamma-proteobacteria (Enterobacteriaceae, Pasteurellaceae, Vibrionaceae) DA Ravcheev, AV Gerasimova, AA Mironov, MS Gelfand BMC genomics 8, 1-17, 2007	68	2007
Comparative genomics of the dormancy regulons in mycobacteria A Gerasimova, AE Kazakov, AP Arkin, I Dubchak, MS Gelfand Journal of bacteriology 193 (14), 3446-3452, 2011	65	2011
Hypermutable non-synonymous sites are under stronger negative selection S Schmidt, A Gerasimova, FA Kondrashov, IA Adzuhbei, AS Kondrashov, ... PLoS genetics 4 (11), e1000281, 2008	49	2008
Predicting cell types and genetic variations contributing to disease by combining GWAS and epigenetic data A Gerasimova, L Chavez, B Li, G Seumois, J Greenbaum, A Rao, ... PloS one 8 (1), e54359, 2013	46	2013
Evolution of the NadR regulon in Enterobacteriaceae AV Gerasimova, MS Gelfand Journal of bioinformatics and computational biology 3 (04), 1007-1019, 2005	31	2005
Development and validation of a high throughput SARS-CoV-2 whole genome sequencing workflow in a clinical laboratory SH Rosenthal, A Gerasimova, R Ruiz-Vega, K Livingston, RM Kagan, ... Scientific Reports 12 (1), 2054, 2022	26	2022
Identification of eight SARS-CoV-2 ORF7a deletion variants in 2,726 clinical specimens SH Rosenthal, RM Kagan, A Gerasimova, B Anderson, D Grover, M Hua, ... Biorxiv, 2020.12. 10.418855, 2020	18	2020
Computer analysis of regulatory signals in bacterial genomes. Fnr binding segments AV Gerasimova, DA Rodionov, AA Mironov, MS Gel'fand Molekuliarnaia Biologiia 35 (6), 1001-1009, 2001	12	2001
Analytical validation and performance characteristics of a 48-gene next-generation sequencing panel for detecting potentially actionable genomic alterations in myeloid neoplasms SH Rosenthal, A Gerasimova, C Ma, HR Li, A Grupe, H Chong, A Acab, ... Plos one 16 (4), e0243683, 2021	11	2021
ArcA regulator of gamma-proteobacteria: identification of the binding signal and description of the regulon AV Gerasimova, MS Gelfand, VY Makeev, AA Mironov, AV Favorov Biophysics 48 (1), 21-25, 2003	10	2003
Development and Validation of a 34‐Gene Inherited Cancer Predisposition Panel Using Next‐Generation Sequencing SH Rosenthal, W Sun, K Zhang, Y Liu, Q Nguyen, A Gerasimova, C Nery, ... BioMed Research International 2020 (1), 3289023, 2020	8	2020
Computer analysis of regulatory signals in bacterial genomes. Fnr binding sites AV Gerasimova, DA Rodionov, AA Mironov, MS Gelfand Molecular Biology 35 (6), 853-861, 2001	4	2001
Comparative genomics and evolution of bacterial regulatory systems MS Gelfand, AV Gerasimova, EA Kotelnikova, ON Laikova, VY Makeev, ... Bioinformatics of Genome Regulation and Structure II, 111-119, 2006	3	2006

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