Prati
Emmanuel Noutahi
Emmanuel Noutahi
Valence Labs
Potvrđena adresa e-pošte na valencelabs.com
Naslov
Citirano
Citirano
Godina
Molecular design in synthetically accessible chemical space via deep reinforcement learning
J Horwood, E Noutahi
ACS omega 5 (51), 32984-32994, 2020
782020
Single-cell profiling reveals that eRNA accumulation at enhancer–promoter loops is not required to sustain transcription
S Rahman, CE Zorca, T Traboulsi, E Noutahi, MR Krause, S Mader, ...
Nucleic acids research 45 (6), 3017-3030, 2017
542017
Efficient gene tree correction guided by species and synteny evolution
E Noutahi, M Semeria, M Lafond, J Seguin, B Boussau, L Guéguen, ...
PLoS One 11 (8), e0159559, 2016
54*2016
Towards interpretable sparse graph representation learning with laplacian pooling
E Noutahi, D Beaini, J Horwood, S Giguère, P Tossou
arXiv preprint arXiv:1905.11577, 2019
442019
The nuclear genome of Rhazya stricta and the evolution of alkaloid diversity in a medically relevant clade of Apocynaceae
JSM Sabir, RK Jansen, D Arasappan, V Calderon, E Noutahi, C Zheng, ...
Scientific reports 6 (1), 33782, 2016
332016
Rapid genetic code evolution in green algal mitochondrial genomes
E Noutahi, V Calderon, M Blanchette, N El-Mabrouk, BF Lang
Molecular Biology and Evolution 36 (4), 766-783, 2019
252019
Gotta be SAFE: a new framework for molecular design
E Noutahi, C Gabellini, M Craig, JSC Lim, P Tossou
Digital Discovery 3 (4), 796-804, 2024
202024
Evolution through segmental duplications and losses: a Super-Reconciliation approach
M Delabre, N El-Mabrouk, KT Huber, M Lafond, V Moulton, E Noutahi, ...
Algorithms for Molecular Biology 15, 1-15, 2020
182020
Real-world molecular out-of-distribution: Specification and investigation
P Tossou, C Wognum, M Craig, H Mary, E Noutahi
Journal of Chemical Information and Modeling 64 (3), 697-711, 2024
152024
Gene family evolution—an algorithmic framework
N El-Mabrouk, E Noutahi
Bioinformatics and Phylogenetics: Seminal Contributions of Bernard Moret, 87-119, 2019
132019
Efficient non-binary gene tree resolution with weighted reconciliation cost
M Lafond, E Noutahi, N El-Mabrouk
27th Annual Symposium on Combinatorial Pattern Matching (CPM 2016), 14: 1-14: 12, 2016
122016
CoreTracker: accurate codon reassignment prediction, applied to mitochondrial genomes
E Noutahi, V Calderon, M Blanchette, BF Lang, N El-Mabrouk
Bioinformatics, 2017
112017
Reconstructing the history of syntenies through super-reconciliation
M Delabre, N El-Mabrouk, KT Huber, M Lafond, V Moulton, E Noutahi, ...
Comparative Genomics: 16th International Conference, RECOMB-CG 2018, Magog …, 2018
82018
Three-dimensional structure model and predicted ATP interaction rewiring of a deviant RNA ligase 2
S Moreira, E Noutahi, G Lamoureux, G Burger
BMC Structural Biology 15, 1-15, 2015
72015
GATC: a genetic algorithm for gene tree construction under the Duplication-Transfer-Loss model of evolution
E Noutahi, N El-Mabrouk
BMC genomics 19, 97-107, 2018
62018
Gu eguen L, El-Mabrouk N, Tannier E. 2016. Efficient gene tree correction guided by genome evolution
E Noutahi, M Semeria, M Lafond, J Seguin, B Boussau
PLoS One 11 (8), e0159559, 0
5
Role of structural and conformational diversity for machine learning potentials
N Shenoy, P Tossou, E Noutahi, H Mary, D Beaini, J Ding
arXiv preprint arXiv:2311.00862, 2023
22023
MoDTI: Modular framework for evaluating inductive biases in DTI modeling
RH Eyono, P Tossou, C Wognum, E Noutahi
ICLR 2023-Machine Learning for Drug Discovery Workshop, 2023
22023
Genome evolution-aware gene trees
E Noutahi, M Semeria, M Lafond, J Seguin, B Boussau, L Guéguen, ...
22015
Benchmarking Transcriptomics Foundation Models for Perturbation Analysis: one PCA still rules them all
I Bendidi, S Whitfield, K Kenyon-Dean, HB Yedder, YE Mesbahi, ...
arXiv preprint arXiv:2410.13956, 2024
12024
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