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| Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak Science, 2014 | 1568 | 2014 |
| Virus genomes reveal factors that spread and sustained the Ebola epidemic G Dudas, LM Carvalho, T Bedford, AJ Tatem, G Baele, NR Faria, DJ Park, ... Nature 544 (7650), 309-315, 2017 | 471 | 2017 |
| Integrating influenza antigenic dynamics with molecular evolution T Bedford, MA Suchard, P Lemey, G Dudas, V Gregory, AJ Hay, ... elife 3, e01914, 2014 | 413 | 2014 |
| Genomic epidemiology reveals multiple introductions of Zika virus into the United States ND Grubaugh, JT Ladner, MUG Kraemer, G Dudas, AL Tan, ... Nature 546 (7658), 401-405, 2017 | 386 | 2017 |
| Temporal and spatial analysis of the 2014–2015 Ebola virus outbreak in West Africa MW Carroll, DA Matthews, JA Hiscox, MJ Elmore, G Pollakis, A Rambaut, ... Nature 524 (7563), 97-101, 2015 | 381 | 2015 |
| The evolution of Ebola virus: Insights from the 2013–2016 epidemic EC Holmes, G Dudas, A Rambaut, KG Andersen Nature 538 (7624), 193-200, 2016 | 364 | 2016 |
| Ebola virus epidemiology, transmission, and evolution during seven months in Sierra Leone DJ Park, G Dudas, S Wohl, A Goba, SLM Whitmer, KG Andersen, ... Cell 161 (7), 1516-1526, 2015 | 353 | 2015 |
| MERS-CoV spillover at the camel-human interface G Dudas, LM Carvalho, A Rambaut, T Bedford elife 7, e31257, 2018 | 281 | 2018 |
| Global disparities in SARS-CoV-2 genomic surveillance AF Brito, E Semenova, G Dudas, GW Hassler, CC Kalinich, MUG Kraemer, ... Nature communications 13 (1), 7003, 2022 | 261 | 2022 |
| The global antigenic diversity of swine influenza A viruses NS Lewis, CA Russell, P Langat, TK Anderson, K Berger, F Bielejec, ... elife 5, e12217, 2016 | 210 | 2016 |
| MERS coronaviruses from camels in Africa exhibit region-dependent genetic diversity DKW Chu, KPY Hui, RAPM Perera, E Miguel, D Niemeyer, J Zhao, ... Proceedings of the National Academy of Sciences 115 (12), 3144-3149, 2018 | 206 | 2018 |
| Rapid outbreak sequencing of Ebola virus in Sierra Leone identifies transmission chains linked to sporadic cases. Virus Evolution 2 (1), vew016, 2016 | 143 | 2016 |
| Phylogenetic Analysis of Guinea 2014 EBOV Ebolavirus Outbreak G Dudas, A Rambaut PLoS currents 6, 2014 | 131 | 2014 |
| Evolution and spread of Ebola virus in Liberia, 2014–2015 JT Ladner, MR Wiley, S Mate, G Dudas, K Prieto, S Lovett, ER Nagle, ... Cell host & microbe 18 (6), 659-669, 2015 | 125 | 2015 |
| Genome-wide evolutionary dynamics of influenza B viruses on a global scale P Langat, J Raghwani, G Dudas, TA Bowden, S Edwards, A Gall, ... PLoS pathogens 13 (12), e1006749, 2017 | 112 | 2017 |
| Reassortment between influenza B lineages and the emergence of a coadapted PB1–PB2–HA gene complex G Dudas, T Bedford, S Lycett, A Rambaut Molecular biology and evolution 32 (1), 162-172, 2015 | 105 | 2015 |
| Single mosquito metatranscriptomics identifies vectors, emerging pathogens and reservoirs in one assay J Batson, G Dudas, E Haas-Stapleton, AL Kistler, LM Li, P Logan, ... Elife 10, e68353, 2021 | 103 | 2021 |
| Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak S Dellicour, G Baele, G Dudas, NR Faria, OG Pybus, MA Suchard, ... Nature communications 9 (1), 2222, 2018 | 87 | 2018 |
| Emergence and spread of SARS-CoV-2 lineage B. 1.620 with variant of concern-like mutations and deletions G Dudas, SL Hong, BI Potter, S Calvignac-Spencer, FS Niatou-Singa, ... Nature communications 12 (1), 5769, 2021 | 85 | 2021 |
