Követés
Anna C. Schaar
Anna C. Schaar
E-mail megerősítve itt: tum.de
Cím
Hivatkozott rá
Hivatkozott rá
Év
Squidpy: a scalable framework for spatial omics analysis
G Palla, H Spitzer, M Klein, D Fischer, AC Schaar, LB Kuemmerle, ...
Nature methods 19 (2), 171-178, 2022
6162022
Best practices for single-cell analysis across modalities
L Heumos, AC Schaar, C Lance, A Litinetskaya, F Drost, L Zappia, ...
Nature Reviews Genetics, 1-23, 2023
5642023
Modeling intercellular communication in tissues using spatial graphs of cells
DS Fischer, AC Schaar, FJ Theis
Nature Biotechnology 41 (3), 332-336, 2023
159*2023
The scverse project provides a computational ecosystem for single-cell omics data analysis
I Virshup, D Bredikhin, L Heumos, G Palla, G Sturm, A Gayoso, I Kats, ...
Nature Biotechnology, 1-3, 2023
1452023
Systemic alterations in neutrophils and their precursors in early-stage chronic obstructive pulmonary disease
TS Kapellos, K Baßler, W Fujii, C Nalkurthi, AC Schaar, L Bonaguro, ...
Cell reports 42 (6), 2023
252023
Nicheformer: a foundation model for single-cell and spatial omics
AC Schaar, A Tejada-Lapuerta, G Palla, R Gutgesell, L Halle, M Minaeva, ...
bioRxiv, 2024.04. 15.589472, 2024
132024
Probe set selection for targeted spatial transcriptomics
LB Kuemmerle, MD Luecken, AB Firsova, L Barros de Andrade e Sousa, ...
Nature methods, 1-11, 2024
112024
Single-cell Best Practices C., Schiller HB, and Theis FJ. 2023
L Heumos, AC Schaar, C Lance, A Litinetskaya, F Drost, L Zappia, ...
Best practices for single-cell analysis across modalities. Nat Rev Genet 24 …, 0
7
GraphCompass: Spatial metrics for differential analyses of cell organization across conditions
M Ali, M Kuijs, S Hediyeh-zadeh, T Treis, K Hrovatin, G Palla, AC Schaar, ...
bioRxiv, 2024.02. 02.578605, 2024
42024
Considerations for building and using integrated single-cell atlases
K Hrovatin, L Sikkema, VA Shitov, G Heimberg, M Shulman, AJ Oliver, ...
Nature Methods, 1-17, 2024
22024
Spatial transcriptomics (ST) of cigarette smoke (CS)-induced experimental COPD
H Chen, I Galvao, C Donovan, R Kim, D Ortega, S Idrees, ...
European Respiratory Journal 60 (suppl 66), 2022
2022
SpatialSSL: Whole-Brain Spatial Transcriptomics in the Mouse Brain with Self-Supervised Learning
T Richter, A Schaar, F Drummer, CW Liao, L Endres, FJ Theis
NeurIPS 2023 AI for Science Workshop, 0
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