Követés
Joshua P Earl
Joshua P Earl
Assistant Professor, Director of Clinical and Translational Bioinformatics, Drexel University
E-mail megerősítve itt: drexel.edu - Kezdőlap
Cím
Hivatkozott rá
Hivatkozott rá
Év
Interaction between the microbiome and TP53 in human lung cancer
KL Greathouse, JR White, AJ Vargas, VV Bliskovsky, JA Beck, ...
Genome biology 19, 1-16, 2018
3492018
Meta-omic characterization of the marine invertebrate microbial consortium that produces the chemotherapeutic natural product ET-743
CM Rath, B Janto, J Earl, A Ahmed, FZ Hu, L Hiller, M Dahlgren, R Kreft, ...
ACS chemical biology 6 (11), 1244-1256, 2011
2492011
Comparative genomic analyses of 17 clinical isolates of Gardnerella vaginalis provide evidence of multiple genetically isolated clades consistent with subspeciation into genovars
A Ahmed, J Earl, A Retchless, SL Hillier, LK Rabe, TL Cherpes, E Powell, ...
Journal of bacteriology 194 (15), 3922-3937, 2012
2122012
Generation of Genic Diversity among Streptococcus pneumoniae Strains via Horizontal Gene Transfer during a Chronic Polyclonal Pediatric Infection
NL Hiller, A Ahmed, E Powell, DP Martin, R Eutsey, J Earl, B Janto, ...
PLoS pathogens 6 (9), e1001108, 2010
1822010
Species-level bacterial community profiling of the healthy sinonasal microbiome using Pacific Biosciences sequencing of full-length 16S rRNA genes
JP Earl, ND Adappa, J Krol, AS Bhat, S Balashov, RL Ehrlich, JN Palmer, ...
Microbiome 6, 1-26, 2018
1642018
The distributed genome hypothesis as a rubric for understanding evolution in situ during chronic bacterial biofilm infectious processes
GD Ehrlich, A Ahmed, J Earl, NL Hiller, JW Costerton, P Stoodley, JC Post, ...
FEMS Immunology & Medical Microbiology 59 (3), 269-279, 2010
1342010
Genome of alkaliphilic Bacillus pseudofirmus OF4 reveals adaptations that support the ability to grow in an external pH range from 7.5 to 11.4
B Janto, A Ahmed, M Ito, J Liu, DB Hicks, S Pagni, OJ Fackelmayer, ...
Environmental microbiology 13 (12), 3289-3309, 2011
972011
Comparative supragenomic analyses among the pathogens Staphylococcus aureus, Streptococcus pneumoniae, and Haemophilus influenzae Using a …
R Boissy, A Ahmed, B Janto, J Earl, BG Hall, JS Hogg, GD Pusch, ...
BMC genomics 12, 1-15, 2011
692011
Comparative analysis and supragenome modeling of twelve Moraxella catarrhalis clinical isolates
JJ Davie, J Earl, SPW de Vries, A Ahmed, FZ Hu, HJ Bootsma, K Stol, ...
BMC genomics 12, 1-17, 2011
642011
HIV-1 genetic variation resulting in the development of new quasispecies continues to be encountered in the peripheral blood of well-suppressed patients
W Dampier, MR Nonnemacher, J Mell, J Earl, GD Ehrlich, V Pirrone, ...
PloS one 11 (5), e0155382, 2016
512016
Comparing culture and molecular methods for the identification of microorganisms involved in necrotizing soft tissue infections
VB Rudkjøbing, TR Thomsen, Y Xu, R Melton-Kreft, A Ahmed, S Eickhardt, ...
BMC infectious diseases 16, 1-13, 2016
502016
The Tsk2/+ mouse fibrotic phenotype is due to a gain-of-function mutation in the PIIINP segment of the Col3a1 gene
KB Long, Z Li, CM Burgwin, SG Choe, V Martyanov, S Sassi-Gaha, ...
Journal of Investigative Dermatology 135 (3), 718-727, 2015
402015
Differences in genotype and virulence among four multidrug-resistant Streptococcus pneumoniae isolates belonging to the PMEN1 clone
NL Hiller, RA Eutsey, E Powell, JP Earl, B Janto, DP Martin, S Dawid, ...
PLoS One 6 (12), e28850, 2011
352011
Comparative Genomic Analyses of the Moraxella catarrhalis Serosensitive and Seroresistant Lineages Demonstrate Their Independent Evolution
JP Earl, SPW de Vries, A Ahmed, E Powell, MP Schultz, PWM Hermans, ...
Genome biology and evolution 8 (4), 955-974, 2016
312016
Genome rearrangements induce biofilm formation in Escherichia coli C – an old model organism with a new application in biofilm research
JE Król, DC Hall, S Balashov, S Pastor, J Sibert, J McCaffrey, S Lang, ...
BMC genomics 20, 1-18, 2019
302019
Nontypeable Haemophilus influenzae Genetic Islands Associated with Chronic Pulmonary Infection
L Zhang, J Xie, M Patel, A Bakhtyar, GD Ehrlich, A Ahmed, J Earl, ...
Public Library of Science 7 (9), e44730, 2012
272012
The bacterial guide to designing a diversified gene portfolio
KA Innamorati, JP Earl, SD Aggarwal, GD Ehrlich, NL Hiller
The pangenome: Diversity, dynamics and evolution of genomes, 51-87, 2020
262020
Design and validation of a supragenome array for determination of the genomic content of Haemophilus influenzae isolates
RA Eutsey, NL Hiller, JP Earl, BA Janto, ME Dahlgren, A Ahmed, E Powell, ...
BMC genomics 14, 1-16, 2013
202013
The pangenome: diversity, dynamics and evolution of genomes
KA Innamorati, JP Earl, SD Aggarwal, GD Ehrlich, NL Hiller, H Tettelin, ...
Springer International Publishing, 2020
192020
Evidence supportive of a bacterial component in the etiology for Alzheimer’s disease and for a temporal-spatial development of a pathogenic microbiome in the brain
Y Moné, JP Earl, JE Król, A Ahmed, B Sen, GD Ehrlich, JR Lapides
Frontiers in cellular and infection microbiology 13, 1123228, 2023
162023
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Cikkek 1–20