| Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis LC Gillet, P Navarro, S Tate, H Röst, N Selevsek, L Reiter, R Bonner, ... Molecular & Cellular Proteomics 11 (6), O111. 016717, 2012 | 3111 | 2012 |
| Data‐independent acquisition‐based SWATH‐MS for quantitative proteomics: a tutorial C Ludwig, L Gillet, G Rosenberger, S Amon, BC Collins, R Aebersold Molecular systems biology 14 (8), e8126, 2018 | 1014 | 2018 |
| Molecular mechanisms of mammalian global genome nucleotide excision repair LCJ Gillet, OD Schärer Chemical reviews 106 (2), 253-276, 2005 | 870 | 2005 |
| OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data HL Röst, G Rosenberger, P Navarro, L Gillet, SM Miladinović, ... Nature biotechnology 32 (3), 219-223, 2014 | 862 | 2014 |
| Mass spectrometry applied to bottom-up proteomics: entering the high-throughput era for hypothesis testing LC Gillet, A Leitner, R Aebersold Annual review of analytical chemistry 9 (1), 449-472, 2016 | 422 | 2016 |
| Rapid mass spectrometric conversion of tissue biopsy samples into permanent quantitative digital proteome maps T Guo, P Kouvonen, CC Koh, LC Gillet, WE Wolski, HL Röst, ... Nature medicine 21 (4), 407-413, 2015 | 394 | 2015 |
| Quantitative variability of 342 plasma proteins in a human twin population Y Liu, A Buil, BC Collins, LCJ Gillet, LC Blum, LY Cheng, O Vitek, ... Molecular systems biology 11 (2), 786, 2015 | 376 | 2015 |
| Building high-quality assay libraries for targeted analysis of SWATH MS data OT Schubert, LC Gillet, BC Collins, P Navarro, G Rosenberger, WE Wolski, ... Nature protocols 10 (3), 426-441, 2015 | 373 | 2015 |
| Quantifying protein interaction dynamics by SWATH mass spectrometry: application to the 14-3-3 system BC Collins, LC Gillet, G Rosenberger, HL Röst, A Vichalkovski, ... Nature methods 10 (12), 1246-1253, 2013 | 368 | 2013 |
| A multicenter study benchmarks software tools for label-free proteome quantification P Navarro, J Kuharev, LC Gillet, OM Bernhardt, B MacLean, HL Röst, ... Nature biotechnology 34 (11), 1130-1136, 2016 | 353 | 2016 |
| Absolute proteome composition and dynamics during dormancy and resuscitation of Mycobacterium tuberculosis OT Schubert, C Ludwig, M Kogadeeva, M Zimmermann, G Rosenberger, ... Cell host & microbe 18 (1), 96-108, 2015 | 232 | 2015 |
| Quantitative measurements of N‐linked glycoproteins in human plasma by SWATH‐MS Y Liu, R Hüttenhain, S Surinova, LCJ Gillet, J Mouritsen, R Brunner, ... Proteomics 13 (8), 1247-1256, 2013 | 232 | 2013 |
| Glycoproteomic analysis of prostate cancer tissues by SWATH mass spectrometry discovers N-acylethanolamine acid amidase and protein tyrosine kinase 7 as signatures for tumor … Y Liu, J Chen, A Sethi, QK Li, L Chen, B Collins, LCJ Gillet, B Wollscheid, ... Molecular & Cellular Proteomics 13 (7), 1753-1768, 2014 | 216 | 2014 |
| NaV1. 5 enhances breast cancer cell invasiveness by increasing NHE1-dependent H+ efflux in caveolae L Brisson, L Gillet, S Calaghan, P Besson, JY Le Guennec, S Roger, ... Oncogene 30 (17), 2070-2076, 2011 | 213 | 2011 |
| Reproducible and consistent quantification of the Saccharomyces cerevisiae proteome by SWATH-mass spectrometry N Selevsek, CY Chang, LC Gillet, P Navarro, OM Bernhardt, L Reiter, ... Molecular & Cellular Proteomics 14 (3), 739-749, 2015 | 210 | 2015 |
| Cardiac sodium channel NaV1. 5 distribution in myocytes via interacting proteins: the multiple pool model D Shy, L Gillet, H Abriel Biochimica et Biophysica Acta (BBA)-Molecular Cell Research 1833 (4), 886-894, 2013 | 200 | 2013 |
| TRIC: an automated alignment strategy for reproducible protein quantification in targeted proteomics HL Röst, Y Liu, G D'Agostino, M Zanella, P Navarro, G Rosenberger, ... Nature methods 13 (9), 777-783, 2016 | 192 | 2016 |
| High‐throughput proteomic analysis of FFPE tissue samples facilitates tumor stratification Y Zhu, T Weiss, Q Zhang, R Sun, B Wang, X Yi, Z Wu, H Gao, X Cai, ... Molecular oncology 13 (11), 2305-2328, 2019 | 144 | 2019 |
| Ranolazine inhibits NaV1.5-mediated breast cancer cell invasiveness and lung colonization V Driffort, L Gillet, E Bon, S Marionneau-Lambot, T Oullier, V Joulin, ... Molecular cancer 13, 1-6, 2014 | 143 | 2014 |
| Dynamic 3D proteomes reveal protein functional alterations at high resolution in situ V Cappelletti, T Hauser, I Piazza, M Pepelnjak, L Malinovska, T Fuhrer, ... Cell 184 (2), 545-559. e22, 2021 | 139 | 2021 |