The Plant Pathogen Pseudomonas syringae pv. tomato Is Genetically Monomorphic and under Strong Selection to Evade Tomato Immunity R Cai, J Lewis, S Yan, H Liu, CR Clarke, F Campanile, NF Almeida, ... PLoS pathogens 7 (8), e1002130, 2011 | 279 | 2011 |
PAMDB, a multilocus sequence typing and analysis database and website for plant-associated microbes NF Almeida, S Yan, R Cai, CR Clarke, CE Morris, NW Schaad, ... Phytopathology 100 (3), 208-215, 2010 | 227 | 2010 |
Tomato receptor FLAGELLIN-SENSING 3 binds flgII-28 and activates the plant immune system SR Hind, SR Strickler, PC Boyle, DM Dunham, Z Bao, IM O'Doherty, ... Nature plants 2 (9), 1-8, 2016 | 213 | 2016 |
Allelic variation in two distinct Pseudomonas syringae flagellin epitopes modulates the strength of plant immune responses but not bacterial motility CR Clarke, D Chinchilla, SR Hind, F Taguchi, R Miki, Y Ichinose, ... New Phytologist 200 (3), 847-860, 2013 | 160 | 2013 |
Comparative transcriptome analyses reveal core parasitism genes and suggest gene duplication and repurposing as sources of structural novelty Z Yang, EK Wafula, LA Honaas, H Zhang, M Das, M Fernandez-Aparicio, ... Molecular biology and evolution 32 (3), 767-790, 2015 | 156 | 2015 |
Multilocus sequence typing of Pseudomonas syringae sensu lato confirms previously described genomospecies and permits rapid identification of P. syringae pv. coriandricola and … CT Bull, CR Clarke, R Cai, BA Vinatzer, TM Jardini, ST Koike Phytopathology 101 (7), 847-858, 2011 | 136 | 2011 |
Molecular dialog between parasitic plants and their hosts CR Clarke, MP Timko, JI Yoder, MJ Axtell, JH Westwood Annual review of Phytopathology 57 (1), 279-299, 2019 | 108 | 2019 |
Horizontal gene transfer is more frequent with increased heterotrophy and contributes to parasite adaptation Z Yang, Y Zhang, EK Wafula, LA Honaas, PE Ralph, S Jones, CR Clarke, ... Proceedings of the National Academy of Sciences 113 (45), E7010-E7019, 2016 | 108 | 2016 |
Pseudomonas syringae Strains Naturally Lacking the Classical P. syringae hrp/hrc Locus Are Common Leaf Colonizers Equipped with an Atypical Type III … CR Clarke, R Cai, DJ Studholme, DS Guttman, BA Vinatzer Molecular plant-microbe interactions 23 (2), 198-210, 2010 | 96 | 2010 |
Harnessing population genomics to understand how bacterial pathogens emerge, adapt to crop hosts, and disseminate BA Vinatzer, CL Monteil, CR Clarke Annual review of phytopathology 52 (1), 19-43, 2014 | 88 | 2014 |
Genome-Enabled Phylogeographic Investigation of the Quarantine Pathogen Ralstonia solanacearum Race 3 Biovar 2 and Screening for Sources of Resistance … CR Clarke, DJ Studholme, B Hayes, B Runde, A Weisberg, R Cai, ... Phytopathology 105 (5), 597-607, 2015 | 66 | 2015 |
Pseudomonas syringae naturally lacking the canonical type III secretion system are ubiquitous in nonagricultural habitats, are phylogenetically diverse and can be pathogenic MD Diallo, CL Monteil, BA Vinatzer, CR Clarke, C Glaux, C Guilbaud, ... The ISME Journal, 2012 | 55 | 2012 |
HopAS1 recognition significantly contributes to Arabidopsis nonhost resistance to Pseudomonas syringae pathogens KH Sohn, SB Saucet, CR Clarke, BA Vinatzer, HE O’Brien, DS Guttman, ... New Phytologist, 2012 | 43 | 2012 |
The evolution, ecology, and mechanisms of infection by gram-positive, plant-associated bacteria SP Thapa, EW Davis, Q Lyu, AJ Weisberg, DM Stevens, CR Clarke, ... Annual Review of Phytopathology 57 (1), 341-365, 2019 | 38 | 2019 |
Cultivar resistance to common scab disease of potato is dependent on the pathogen species CR Clarke, CG Kramer, RR Kotha, LA Wanner, DL Luthria, M Kramer Phytopathology 109 (9), 1544-1554, 2019 | 37 | 2019 |
Herbicide injury induces DNA methylome alterations in Arabidopsis G Kim, CR Clarke, H Larose, HT Tran, DC Haak, L Zhang, S Askew, ... PeerJ 5, e3560, 2017 | 34 | 2017 |
Comparative genomics of Pseudomonas syringae pathovar tomato reveals novel chemotaxis pathways associated with motility and plant pathogenicity CR Clarke, BW Hayes, BJ Runde, E Markel, BM Swingle, BA Vinatzer PeerJ 4, e2570, 2016 | 32 | 2016 |
Contributions of the effector gene hopQ1‐1 to differences in host range between Pseudomonas syringae pv. phaseolicola and P. syringae pv. tabaci P Ferrante, CR Clarke, KA Cavanaugh, RW Michelmore, R Buonaurio, ... Molecular plant pathology 10 (6), 837-842, 2009 | 29 | 2009 |
Experimental evidence pointing to rain as a reservoir of tomato phyllosphere microbiota ME Mechan Llontop, L Tian, P Sharma, L Heflin, V Bernal-Galeano, ... Phytobiomes Journal 5 (4), 382-399, 2021 | 28 | 2021 |
Low-dose foliar treatments of the auxin analog 2, 4-D reduce potato common scab and powdery scab for multiple potato cultivars and enhance root development CR Clarke, RS Tegg, HK Thompson, C Frederick, KG Haynes, M Kramer, ... Crop protection 136, 105208, 2020 | 19 | 2020 |