Követés
Julia K. Varga
Julia K. Varga
E-mail megerősítve itt: mail.huji.ac.il
Cím
Hivatkozott rá
Hivatkozott rá
Év
Harnessing protein folding neural networks for peptide–protein docking
T Tsaban, JK Varga, O Avraham, Z Ben-Aharon, A Khramushin, ...
Nature communications 13 (1), 176, 2022
2412022
Systematic discovery of protein interaction interfaces using AlphaFold and experimental validation
CY Lee, D Hubrich, JK Varga, C Schäfer, M Welzel, E Schumbera, ...
Molecular Systems Biology 20 (2), 75-97, 2024
382024
Matching protein surface structural patches for high-resolution blind peptide docking
A Khramushin, Z Ben-Aharon, T Tsaban, JK Varga, O Avraham, ...
Proceedings of the National Academy of Sciences 119 (18), e2121153119, 2022
22*2022
Identification of extracellular segments by mass spectrometry improves topology prediction of transmembrane proteins
T Langó, G Róna, É Hunyadi-Gulyás, L Turiák, J Varga, L Dobson, ...
Scientific reports 7 (1), 42610, 2017
202017
TSTMP: target selection for structural genomics of human transmembrane proteins
J Varga, L Dobson, I Reményi, GE Tusnády
Nucleic Acids Research 45 (D1), D325-D330, 2017
162017
Discriminating physiological from non‐physiological interfaces in structures of protein complexes: A community‐wide study
H Schweke, Q Xu, G Tauriello, L Pantolini, T Schwede, F Cazals, ...
Proteomics 23 (17), 2200323, 2023
142023
TMCrys: predict propensity of success for transmembrane protein crystallization
JK Varga, GE Tusnady
Bioinformatics 34 (18), 3126-3130, 2018
142018
A method for characterizing Cas9 variants via a one-million target sequence library of self-targeting sgRNAs
A Tálas, K Huszár, PI Kulcsár, JK Varga, É Varga, E Tóth, Z Welker, ...
Nucleic Acids Research 49 (6), e31-e31, 2021
132021
Structural study of UFL1‐UFC1 interaction uncovers the role of UFL1 N‐terminal helix in ufmylation
S Banerjee, JK Varga, M Kumar, G Zoltsman, S Rotem‐Bamberger, ...
EMBO reports 24 (12), e56920, 2023
92023
Structure-based prediction of HDAC6 substrates validated by enzymatic assay reveals determinants of promiscuity and detects new potential substrates
JK Varga, K Diffley, KR Welker Leng, CA Fierke, O Schueler-Furman
Scientific reports 12 (1), 1-15, 2022
92022
TOPDOM: database of conservatively located domains and motifs in proteins
J Varga, L Dobson, GE Tusnády
Bioinformatics 32 (17), 2725-2726, 2016
72016
Partial proteolysis improves the identification of the extracellular segments of transmembrane proteins by surface biotinylation
T Langó, ZG Pataki, L Turiák, A Ács, JK Varga, G Várady, N Kucsma, ...
Scientific Reports 10 (1), 1-11, 2020
52020
Substrate recognition principles for the PP2A-B55 protein phosphatase
T Kruse, DH Garvanska, JK Varga, W Garland, BC McEwan, JB Hein, ...
Science Advances 10 (40), eadp5491, 2024
42024
Who binds better? let Alphafold2 Decide!
JK Varga, O Schueler‐Furman
Angewandte Chemie 135 (28), e202303526, 2023
42023
actifpTM: a refined confidence metric of AlphaFold2 predictions involving flexible regions
JK Varga, S Ovchinnikov, O Schueler-Furman
arXiv preprint arXiv:2412.15970, 2024
22024
Unbiased phenotype and genotype matching maximizes gene discovery and diagnostic yield
J Rips, O Halstuk, A Fuchs, Z Lang, T Sido, S Gershon-Naamat, ...
Genetics in Medicine 26 (4), 101068, 2024
22024
The TMCrys server for supporting crystallization of transmembrane proteins
JK Varga, GE Tusnády
Bioinformatics 35 (20), 4203-4204, 2019
22019
Binding of SARS-CoV-2 nucleocapsid protein to uninfected epithelial cells induces antibody-mediated complement deposition
J Fahoum, M Billan, JK Varga, D Padawer, M Elgrably-Weiss, P Basu, ...
bioRxiv, 2024.03. 17.585388, 2024
2024
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Cikkek 1–18