Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly H Li, J Janssens, M De Waegeneer, SS Kolluru, K Davie, V Gardeux, ...
Science 375 (6584), eabk2432, 2022
505 2022 Multi-view low-rank sparse subspace clustering M Brbić, I Kopriva
Pattern Recognition 73, 247-258, 2018
444 2018 Organization of the human intestine at single-cell resolution JW Hickey, WR Becker, SA Nevins, A Horning, AE Perez, C Zhu, B Zhu, ...
Nature 619 (7970), 572, 2023
153 2023 Chemoreceptor co-expression in Drosophila melanogaster olfactory neurons D Task, CC Lin, A Vulpe, A Afify, S Ballou, M Brbic, P Schlegel, J Raji, ...
eLife 11, e72599, 2022
133 * 2022 MARS: discovering novel cell types across heterogeneous single-cell experiments M Brbić, M Zitnik, S Wang, AO Pisco, RB Altman, S Darmanis, J Leskovec
Nature Methods, 1-7, 2020
133 2020 The landscape of microbial phenotypic traits and associated genes M Brbić, M Piškorec, V Vidulin, A Kriško, T Šmuc, F Supek
Nucleic Acids Research 44 (21), 10074–10090, 2016
117 2016 Concept Learners for Few-Shot Learning K Cao*, M Brbić*, J Leskovec
International Conference on Learning Representations (ICLR), 2021
100 2021 A synthesis of bacterial and archaeal phenotypic trait data JS Madin, DA Nielsen, M Brbić, R Corkrey, D Danko, K Edwards, ...
Scientific Data 7 (1), 1-8, 2020
92 2020 Single-cell transcriptomes of developing and adult olfactory receptor neurons in Drosophila CN McLaughlin*, M Brbić*, Q Xie, T Li, F Horns, SS Kolluru, JM Kebschull, ...
eLife 10, e63856, 2021
91 2021 Annotation of spatially resolved single-cell data with STELLAR M Brbić*, K Cao*, JW Hickey*, Y Tan, MP Snyder, GP Nolan, J Leskovec
Nature Methods, 1-8, 2022
88 2022 M Brbić, I Kopriva
IEEE Transactions on Cybernetics 50 (4), 1711-1725, 2018
86 2018 Selective sampling-based scalable sparse subspace clustering S Matsushima, M Brbić
Neural Information Processing Systems (NeurIPS), 12416-12425, 2019
70 2019 Leveraging the Cell Ontology to classify unseen cell types S Wang, AO Pisco, A McGeever, M Brbic, M Zitnik, S Darmanis, ...
Nature communications 12 (1), 1-11, 2021
62 * 2021 Aging Fly Cell Atlas identifies exhaustive aging features at cellular resolution TC Lu*, M Brbić*, YJ Park, T Jackson, J Chen, SS Kolluru, Y Qi, ...
Science 380 (6650), eadg0934, 2023
52 2023 Toward universal cell embeddings: integrating single-cell RNA-seq datasets across species with SATURN Y Rosen*, M Brbić*, Y Roohani*, K Swanson, Z Li, J Leskovec
Nature Methods, 1-9, 2024
44 2024 Temporal evolution of single-cell transcriptomes of Drosophila olfactory projection neurons Q Xie, M Brbic, F Horns, SS Kolluru, RC Jones, J Li, AR Reddy, A Xie, ...
eLife 10, e63450, 2021
36 2021 Global shifts in genome and proteome composition are very tightly coupled M Brbić, T Warnecke, A Kriško, F Supek
Genome Biology and Evolution 7 (6), 1519-1532, 2015
29 2015 Tuning machine learning algorithms for content-based movie recommendation M Brbić, I Podnar Zarko
Intelligent Decision Technologies 9 (3), 233-242, 2015
7 2015 The Pursuit of Human Labeling: A New Perspective on Unsupervised Learning A Gadetsky, M Brbić
Neural Information Processing Systems (NeurIPS), 2023
5 2023 Open-world semi-supervised learning K Cao, M Brbic, J Leskovec
International Conference on Learning Representations, 2022
5 * 2022 