| BERT-Promoter: An improved sequence-based predictor of DNA promoter using BERT pre-trained model and SHAP feature selection NQK Le, QT Ho, VN Nguyen, JS Chang Computational Biology and Chemistry 99, 107732, 2022 | 79 | 2022 |
| SNARE-CNN: a 2D convolutional neural network architecture to identify SNARE proteins from high-throughput sequencing data NQK Le, VN Nguyen PeerJ Computer Science 5, e177, 2019 | 60 | 2019 |
| UbiNet: an online resource for exploring the functional associations and regulatory networks of protein ubiquitylation VN Nguyen, KY Huang, JTY Weng, KR Lai, TY Lee Database 2016, baw054, 2016 | 36 | 2016 |
| An interpretable deep learning model for classifying adaptor protein complexes from sequence information QH Kha, TO Tran, VN Nguyen, K Than, NQK Le Methods 207, 90-96, 2022 | 33 | 2022 |
| SuccSite: Incorporating Amino Acid Composition and Informative k-Spaced Amino Acid Pairs to Identify Protein Succinylation Sites HJ Kao, VN Nguyen, KY Huang, WC Chang, TY Lee Genomics, Proteomics and Bioinformatics 18 (2), 208-219, 2020 | 32 | 2020 |
| A new scheme to characterize and identify protein ubiquitination sites VN Nguyen, KY Huang, CH Huang, KR Lai, TY Lee IEEE/ACM Transactions on Computational Biology and Bioinformatics 14 (2 …, 2016 | 32 | 2016 |
| Characterization and identification of ubiquitin conjugation sites with E3 ligase recognition specificities VN Nguyen, KY Huang, CH Huang, TH Chang, NA Bretaña, KR Lai, ... BMC bioinformatics 16, 1-11, 2015 | 26 | 2015 |
| The prediction of Succinylation site in protein by analyzing amino acid composition VM Bui, VN Nguyen Advances in Information and Communication Technology: Proceedings of the …, 2017 | 8 | 2017 |
| A new schema to identify S-farnesyl cysteine prenylation sites with substrate motifs VN Nguyen, TX Tran, HM Nguyen, HT Nguyen, TY Lee Advances in Information and Communication Technology: Proceedings of the …, 2017 | 8 | 2017 |
| Using a hybrid neural network architecture for DNA sequence representation: A study on N4-methylcytosine sites VN Nguyen, TT Ho, TD Doan, NQK Le Computers in Biology and Medicine, 108664, 2024 | 5 | 2024 |
| Exploiting two-layer support vector machine to predict protein sumoylation sites VN Nguyen, HK Do, TX Tran, NQK Le, AT Le, TY Lee Advances in Engineering Research and Application: Proceedings of the …, 2019 | 5 | 2019 |
| Recent progress in machine learning approaches for predicting carcinogenicity in drug development NQK Le, TX Tran, PA Nguyen, TT Ho, VN Nguyen Expert Opinion on Drug Metabolism & Toxicology, 2024 | 4 | 2024 |
| An approach by exploiting support vector machine to characterize and identify protein SUMOylation sites VN Nguyen, HM Nguyen, TX Tran JASSA 505, 877, 2012 | 4 | 2012 |
| Incorporating Natural Language-Based and Sequence-Based Features to Predict Protein Sumoylation Sites TX Tran, VN Nguyen, NQK Le Conference on Information Technology and its Applications, 74-88, 2023 | 3 | 2023 |
| Non-HPV Perianal and Anorectal Sexually Transmitted Viral Infections M Murphy, GR Chedister, V George Clinics in colon and rectal surgery 32 (05), 340-346, 2019 | 3 | 2019 |
| Enhancing Arabidopsis thaliana ubiquitination site prediction through knowledge distillation and natural language processing VN Nguyen, TX Tran, TT Nguyen, NQK Le Methods 232, 65-71, 2024 | 1 | 2024 |
| Enhanced Prediction of mRNA Subcellular Localization Using a Novel Ensemble Learning and Hybrid Approach TT Nguyen, VN Nguyen, TX Tran, NQK Le International Conference on Advances in Information and Communication …, 2023 | 1 | 2023 |
| Chứng minh độ khó NP-hard của một số bài toán Lưới Thân Quang Khoát, Nguyễn Hồng Tân and Nguyễn Văn Núi Vietnam Journal on Information Technologies and Communications 19 (2), 124-133, 2008 | 1* | 2008 |
| Integrating CNN and Bi-LSTM for protein succinylation sites prediction based on Natural Language Processing technique TX Tran, NQK Le, VN Nguyen Computers in Biology and Medicine 186, 109664, 2025 | | 2025 |
| CLW_SUMO: A hybrid deep learning model for predicting protein SUMOylation sites TX Tran, NQK Le, VN Nguyen Journal of Computer Science and Cybernetics 40 (4), 315-325, 2024 | | 2024 |
