| Bistability in apoptosis: roles of bax, bcl-2, and mitochondrial permeability transition pores EZ Bagci, Y Vodovotz, TR Billiar, GB Ermentrout, I Bahar Biophysical journal 90 (5), 1546-1559, 2006 | 399 | 2006 |
| Inflammatory modulation of hepatocyte apoptosis by nitric oxide: in vivo, in vitro, and in silico studies Y Vodovotz, PKM Kim, EZ Bagci, GB Ermentrout, CC Chow, I Bahar, ... Current Molecular Medicine 4 (7), 753-762, 2004 | 109 | 2004 |
| Residue packing in proteins: uniform distribution on a coarse-grained scale Z Bagci, RL Jernigan, I Bahar The Journal of chemical physics 116 (5), 2269-2276, 2002 | 54 | 2002 |
| Residue coordination in proteins conforms to the closest packing of spheres Z Bagci, RL Jernigan, I Bahar Polymer 43 (2), 451-459, 2002 | 42 | 2002 |
| The origin and extent of coarse‐grained regularities in protein internal packing Z Bagci, A Kloczkowski, RL Jernigan, I Bahar Proteins: Structure, Function, and Bioinformatics 53 (1), 56-67, 2003 | 39 | 2003 |
| Computational insights on the competing effects of nitric oxide in regulating apoptosis EZ Bagci, Y Vodovotz, TR Billiar, B Ermentrout, I Bahar PLoS One 3 (5), e2249, 2008 | 32 | 2008 |
| A quantitative model of the effect of unreplicated DNA on cell cycle progression in frog egg extracts J Zwolak, N Adjerid, EZ Bagci, JJ Tyson, JC Sible Journal of theoretical biology 260 (1), 110-120, 2009 | 15 | 2009 |
| Analysis of a mathematical model of apoptosis: individual differences and malfunction in programmed cell death EZ Bagci, SM Sen, MC Camurdan Journal of clinical monitoring and computing 27, 465-479, 2013 | 13 | 2013 |
| Limitations of using mass action kinetics method in modeling biochemical systems: illustration for a second order reaction C Sayikli, EZ Bagci Computational Science and Its Applications-ICCSA 2011: International …, 2011 | 6 | 2011 |
| The role of nitric oxide in apoptosis and autophagy: biochemical and computational studies PA Loughran, EZ Bagci, R Zamora, Y Vodovotz, TR Billiar Nitric Oxide, 513-537, 2010 | 6 | 2010 |
| Bistability analysis of an apoptosis model in the presence of nitric oxide SM Sen, EZ Bagci, MC Camurdan Bulletin of mathematical biology 73, 1952-1968, 2011 | 4 | 2011 |
| A novel measure to analyze protein structures: Aspect ratio in protein alpha shapes EZ Bagci, F Senguler‐Ciftci, U Ciftci, A Demir Proteins: Structure, Function, and Bioinformatics 89 (10), 1270-1276, 2021 | 2 | 2021 |
| Residue packing in globular and intrinsically disordered proteins RM Aydinkal, EZ Bagci Proteins: Structure, Function, and Bioinformatics 86 (4), 434-438, 2018 | 1 | 2018 |
| Monthly Activation Dynamics and Local Dispersion Patterns of Three Ecophysiologically-Different Woodlice Species (Isopoda: Oniscidea) in the Same Locality in Eastern Thrace … NK Tulgar, A Akcay, EZ Bagci, S Kar Acta Zoologica Bulgarica 76 (3), 2024 | | 2024 |
| Mathematical modeling and simulation of apoptosis and nitric oxide effects EZ Bagci University of Pittsburgh, 2007 | | 2007 |
| Mathematical Modeling of Cardiolipin Associated Reactions/Steps in Mitochondrial Apoptotic Pathways EZ Bagci, I Bahar, M Erdogan, VE Kagan, C Sayikli, T Gurel, S Yildirim | | |
