Jakob Wirbel

Dikutip oleh

	Semua	Sejak 2020
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Georg ZellerLUMC Leiden & EMBL HeidelbergEmail yang diverifikasi di embl.de
Peer BorkDirector of EMBL HeidelbergEmail yang diverifikasi di embl.de
Shinichi SunagawaETH Zurich; Swiss Institute of BioinformaticsEmail yang diverifikasi di ethz.ch
Alessio MilaneseScientist, DSMEmail yang diverifikasi di biol.ethz.ch
Nicolai KarcherPostdoc, EMBL HeidelbergEmail yang diverifikasi di embl.de
Michael Kuhnresearch staff scientist & research coordinator in the lab of Peer Bork, EMBLEmail yang diverifikasi di embl.de
Renato AlvesEuropean Molecular Biology LaboratoryEmail yang diverifikasi di embl.de
Thomas Sebastian B. SchmidtSchool of Medicine & APC Microbiome, University College CorkEmail yang diverifikasi di ucc.ie
Oleksandr M. MaistrenkoRoyal Netherlands Institute for Sea Research (NIOZ)Email yang diverifikasi di nioz.nl
Lisa MaierUniversity of TübingenEmail yang diverifikasi di uni-tuebingen.de
Kiran Raosaheb PatilMRC Toxicology Unit, University of CambridgeEmail yang diverifikasi di cam.ac.uk
Nassos TypasGroup Leader, EMBLEmail yang diverifikasi di embl.de
Luis Pedro CoelhoCentre for Microbiome Research, Queensland University of TechnologyEmail yang diverifikasi di qut.edu.au
Simone S LiResearch Group Leader & NHMRC Early Career Fellow, Monash University, AustraliaEmail yang diverifikasi di monash.edu
Paul Igor CosteaBASFEmail yang diverifikasi di basf.com
Anita VoigtDuke UniversityEmail yang diverifikasi di duke.edu
Paul WilmesProfessorEmail yang diverifikasi di uni.lu
Matthew Robert HaywardSenior Scientist at DSM-FirmenichEmail yang diverifikasi di dsm.com
Anna Heintz-BuschartUniversity of AmsterdamEmail yang diverifikasi di uva.nl
Konrad ZychSenior Bioinformatician, RocheEmail yang diverifikasi di contractors.roche.com

Ikuti

Jakob Wirbel

Postdoctoral Fellow, Stanford School of Medicine

Email yang diverifikasi di stanford.edu - Beranda

microbiome bioinformatics machine learning statistics


Judul Urutkan menurut kutipan Urutkan menurut tahun Urutkan menurut judul	Dikutip oleh Dikutip oleh	Tahun
Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer J Wirbel, PT Pyl, E Kartal, K Zych, A Kashani, A Milanese, JS Fleck, ... Nature medicine 25 (4), 679-689, 2019	1060	2019
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ... Nature medicine 25 (4), 667-678, 2019	833	2019
Extensive transmission of microbes along the gastrointestinal tract TSB Schmidt, MR Hayward, LP Coelho, SS Li, PI Costea, AY Voigt, ... eLife 8, e42693, 2019	479	2019
Unravelling the collateral damage of antibiotics on gut bacteria L Maier, CV Goemans, J Wirbel, M Kuhn, C Eberl, M Pruteanu, P Müller, ... Nature 599 (7883), 120-124, 2021	275	2021
A faecal microbiota signature with high specificity for pancreatic cancer E Kartal, TSB Schmidt, E Molina-Montes, S Rodríguez-Perales, J Wirbel, ... Gut 71 (7), 1359-1372, 2022	191	2022
Microbiome meta-analysis and cross-disease comparison enabled by the SIAMCAT machine learning toolbox J Wirbel, K Zych, M Essex, N Karcher, E Kartal, G Salazar, P Bork, ... Genome biology 22 (1), 93, 2021	188	2021
Identifying temporal and spatial patterns of variation from multimodal data using MEFISTO B Velten, JM Braunger, R Argelaguet, D Arnol, J Wirbel, D Bredikhin, ... Nature methods 19 (2), 179-186, 2022	136	2022
Commensal Clostridiales strains mediate effective anti-cancer immune response against solid tumors A Montalban-Arques, E Katkeviciute, P Busenhart, A Bircher, J Wirbel, ... Cell Host & Microbe 29 (10), 1573-1588. e7, 2021	121	2021
Cultivation-independent genomes greatly expand taxonomic-profiling capabilities of mOTUs across various environments HJ Ruscheweyh, A Milanese, L Paoli, N Karcher, Q Clayssen, MI Keller, ... Microbiome 10 (1), 212, 2022	66	2022
Calorie restriction improves metabolic state independently of gut microbiome composition: a randomized dietary intervention trial SA Sowah, A Milanese, R Schübel, J Wirbel, E Kartal, TS Johnson, ... Genome medicine 14 (1), 30, 2022	43	2022
Metabolic models predict bacterial passengers in colorectal cancer DR Garza, R Taddese, J Wirbel, G Zeller, A Boleij, MA Huynen, BE Dutilh Cancer & metabolism 8, 1-13, 2020	40	2020
Phosphoproteomics-based profiling of kinase activities in cancer cells J Wirbel, P Cutillas, J Saez-Rodriguez Cancer Systems Biology: Methods and Protocols, 103-132, 2018	39	2018
Microbiota-dependent activation of the myeloid calcineurin-NFAT pathway inhibits B7H3-and B7H4-dependent anti-tumor immunity in colorectal cancer K Peuker, A Strigli, DVF Tauriello, A Hendricks, W von Schönfels, ... Immunity 55 (4), 701-717. e7, 2022	37	2022
Depression and fatigue in active IBD from a microbiome perspective—a Bayesian approach to faecal metagenomics AK Thomann, T Wüstenberg, J Wirbel, LL Knoedler, PA Thomann, ... BMC medicine 20 (1), 366, 2022	36	2022
Intragenic DNA inversions expand bacterial coding capacity RB Chanin, PT West, J Wirbel, MO Gill, GZM Green, RM Park, N Enright, ... Nature 634 (8032), 234-242, 2024	13	2024
Prediction of combination therapies based on topological modeling of the immune signaling network in multiple sclerosis M Bernardo-Faura, M Rinas, J Wirbel, I Pertsovskaya, V Pliaka, ... Genome Medicine 13, 1-16, 2021	12	2021
SIAMCAT: user-friendly and versatile machine learning workflows for statistically rigorous microbiome analyses J Wirbel, K Zych, M Essex, N Karcher, E Kartal, G Salazar, P Bork, ... bioRxiv, 931808, 2020	12	2020
Dissecting the collateral damage of antibiotics on gut microbes L Maier, CV Goemans, M Pruteanu, J Wirbel, M Kuhn, E Cacace, ... BioRxiv, 2020.01. 09.893560, 2020	11	2020
Location and condition based reconstruction of colon cancer microbiome from human RNA sequencing data G Sambruni, AD Macandog, J Wirbel, D Cagnina, C Catozzi, T Dallavilla, ... Genome Medicine 15 (1), 32, 2023	9	2023
C. difficile may be overdiagnosed in adults and is a prevalent commensal in infants P Ferretti, J Wirbel, OM Maistrenko, T Van Rossum, R Alves, A Fullam, ... eLife 12, 2023	7	2023

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