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Eleven grand challenges in single-cell data science
D Lähnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ...
Genome biology 21, 1-35, 2020
11752020
Genomic and bioinformatic profiling of mutational neoepitopes reveals new rules to predict anticancer immunogenicity
F Duan, J Duitama, S Al Seesi, CM Ayres, SA Corcelli, AP Pawashe, ...
Journal of Experimental Medicine 211 (11), 2231-2248, 2014
4612014
Key parameters of tumor epitope immunogenicity revealed through a consortium approach improve neoantigen prediction
DK Wells, MM van Buuren, KK Dang, VM Hubbard-Lucey, KCF Sheehan, ...
Cell 183 (3), 818-834. e13, 2020
4262020
Estimation of alternative splicing isoform frequencies from RNA-Seq data
M Nicolae, S Mangul, II Măndoiu, A Zelikovsky
Algorithms for molecular biology 6, 1-13, 2011
2612011
Selecting forwarding neighbors in wireless ad hoc networks
G Călinescu, I Măndoiu, PJ Wan, A Zelikovsky
Proceedings of the 5th international workshop on Discrete algorithms and …, 2001
2612001
Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development
MB Renfree, AT Papenfuss, JE Deakin, J Lindsay, T Heider, K Belov, ...
Genome biology 12, 1-26, 2011
2122011
Inferring viral quasispecies spectra from 454 pyrosequencing reads
I Astrovskaya, B Tork, S Mangul, K Westbrooks, I Măndoiu, P Balfe, ...
BMC bioinformatics 12, 1-10, 2011
1562011
Symmetric connectivity with minimum power consumption in radio networks
G Călinescu, II Măndoiu, A Zelikovsky
Foundations of Information Technology in the Era of Network and Mobile …, 2002
1452002
Highly scalable algorithms for rectilinear and octilinear Steiner trees
AB Kahng, II Măndoiu, AZ Zelikovsky
Proceedings of the 2003 Asia and South Pacific Design Automation Conference …, 2003
1162003
Power efficient range assignment for symmetric connectivity in static ad hoc wireless networks
E Althaus, G Călinescu, II Măndoiu, S Prasad, N Tchervenski, ...
Wireless Networks 12, 287-299, 2006
1132006
Power efficient range assignment in ad-hoc wireless networks
E Althaus, G Calinescu, II Mandoiu, S Prasad, N Tchervenski, ...
2003 IEEE Wireless Communications and Networking, 2003. WCNC 2003. 3, 1889-1894, 2003
1092003
Lecture notes in computer science (including subseries lecture notes in artificial intelligence and lecture notes in bioinformatics): Preface
M Abe, K Aoki, G Ateniese, R Avanzi, Z Beerliová, O Billet, A Biryukov, ...
Lecture Notes in Computer Science (including subseries Lecture Notes in …, 2006
100*2006
Identification of mammalian orthologs using local synteny
J Jun, II Mandoiu, CE Nelson
BMC genomics 10, 1-13, 2009
922009
Non-tree routing for reliability and yield improvement
AB Kahng, B Liu, II Mǎandoiu
Proceedings of the 2002 IEEE/ACM international conference on Computer-aided …, 2002
812002
The Y architecture for on-chip interconnect: analysis and methodology
H Chen, CK Cheng, AB Kahng, II Mandoiu, Q Wang, B Yao
IEEE Transactions on Computer-Aided Design of Integrated Circuits and …, 2005
732005
Area under the curve as a tool to measure kinetics of tumor growth in experimental animals
F Duan, S Simeone, R Wu, J Grady, I Mandoiu, PK Srivastava
Journal of immunological methods 382 (1-2), 224-228, 2012
712012
Mass spectrometry–driven exploration reveals nuances of neoepitope-driven tumor rejection
H Ebrahimi-Nik, J Michaux, WL Corwin, GLJ Keller, T Shcheglova, ...
JCI insight 4 (14), 2019
672019
Methylome Dynamics of Bovine Gametes and in vivo Early Embryos
JE Duan, ZC Jiang, F Alqahtani, I Mandoiu, H Dong, X Zheng, SL Marjani, ...
Frontiers in genetics 10, 512, 2019
652019
Bootstrap-based differential gene expression analysis for RNA-Seq data with and without replicates
S Al Seesi, YT Tiagueu, A Zelikovsky, II Măndoiu
BMC genomics 15, 1-10, 2014
652014
DNA-BAR: distinguisher selection for DNA barcoding
B DasGupta, KM Konwar, II Măndoiu, AA Shvartsman
Bioinformatics 21 (16), 3424-3426, 2005
632005
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