| ARGs-OAP v2. 0 with an expanded SARG database and Hidden Markov Models for enhancement characterization and quantification of antibiotic resistance genes in environmental … X Yin, XT Jiang, B Chai, L Li, Y Yang, JR Cole, JM Tiedje, T Zhang Bioinformatics 34 (13), 2263-2270, 2018 | 519 | 2018 |
| An omics-based framework for assessing the health risk of antimicrobial resistance genes AN Zhang, JM Gaston, CL Dai, S Zhao, M Poyet, M Groussin, X Yin, LG Li, ... Nature communications 12 (1), 4765, 2021 | 514 | 2021 |
| Wastewater treatment plant resistomes are shaped by bacterial composition, genetic exchange, and upregulated expression in the effluent microbiomes F Ju, K Beck, X Yin, A Maccagnan, CS McArdell, HP Singer, DR Johnson, ... The ISME journal 13 (2), 346-360, 2019 | 389 | 2019 |
| The prevalence of integrons as the carrier of antibiotic resistance genes in natural and man-made environments L Ma, AD Li, XL Yin, T Zhang Environmental science & technology 51 (10), 5721-5728, 2017 | 321 | 2017 |
| Antibiotic resistome in landfill leachate from different cities of China deciphered by metagenomic analysis R Zhao, J Feng, X Yin, J Liu, W Fu, TU Berendonk, T Zhang, X Li, B Li Water research 134, 126-139, 2018 | 159 | 2018 |
| Identification and quantification of bacterial genomes carrying antibiotic resistance genes and virulence factor genes for aquatic microbiological risk assessment J Liang, G Mao, X Yin, L Ma, L Liu, Y Bai, T Zhang, J Qu Water Research 168, 115160, 2020 | 155 | 2020 |
| Tracking antibiotic resistance gene pollution from different sources using machine-learning classification LG Li, X Yin, T Zhang Microbiome 6, 1-12, 2018 | 150 | 2018 |
| Source tracking of antibiotic resistance genes in the environment—Challenges, progress, and prospects LG Li, Q Huang, X Yin, T Zhang Water Research 185, 116127, 2020 | 149 | 2020 |
| Selection for antimicrobial resistance is reduced when embedded in a natural microbial community U Klümper, M Recker, L Zhang, X Yin, T Zhang, A Buckling, WH Gaze The ISME journal 13 (12), 2927-2937, 2019 | 148 | 2019 |
| Novel insights into selection for antibiotic resistance in complex microbial communities AK Murray, L Zhang, X Yin, T Zhang, A Buckling, J Snape, WH Gaze MBio 9 (4), 10.1128/mbio. 00969-18, 2018 | 127 | 2018 |
| Exploration of the antibiotic resistome in a wastewater treatment plant by a nine-year longitudinal metagenomic study X Yin, Y Deng, L Ma, Y Wang, LYL Chan, T Zhang Environment international 133, 105270, 2019 | 105 | 2019 |
| Enhancement of surface flow constructed wetlands performance at low temperature through seasonal plant collocation J Zhang, H Sun, W Wang, Z Hu, X Yin, HH Ngo, W Guo, J Fan Bioresource Technology 224, 222-228, 2017 | 79 | 2017 |
| ARGs-OAP v3. 0: Antibiotic-resistance gene database curation and analysis pipeline optimization X Yin, X Zheng, L Li, AN Zhang, XT Jiang, T Zhang Engineering 27, 234-241, 2023 | 73 | 2023 |
| An assessment of resistome and mobilome in wastewater treatment plants through temporal and spatial metagenomic analysis X Yin, Y Yang, Y Deng, Y Huang, L Li, LYL Chan, T Zhang Water Research 209, 117885, 2022 | 73 | 2022 |
| Toward a universal unit for quantification of antibiotic resistance genes in environmental samples X Yin, X Chen, XT Jiang, Y Yang, B Li, MHH Shum, TTY Lam, GM Leung, ... Environmental Science & Technology 57 (26), 9713-9721, 2023 | 69 | 2023 |
| Successional dynamics and alternative stable states in a saline activated sludge microbial community over 9 years Y Wang, J Ye, F Ju, L Liu, JA Boyd, Y Deng, DH Parks, X Jiang, X Yin, ... Microbiome 9, 1-15, 2021 | 60 | 2021 |
| Evidence for Long-Term Anthropogenic Pollution: The Hadal Trench as a Depository and Indicator for Dissemination of Antibiotic Resistance Genes H Yang, R Liu, H Liu, C Wang, X Yin, M Zhang, J Fang, T Zhang, L Ma Environmental science & technology 55 (22), 15136-15148, 2021 | 59 | 2021 |
| Distribution of arsenic and its biotransformation genes in sediments from the East China Sea T Guo, L Li, W Zhai, B Xu, X Yin, Y He, J Xu, T Zhang, X Tang Environmental Pollution 253, 949-958, 2019 | 52 | 2019 |
| Improving low-temperature performance of surface flow constructed wetlands using Potamogeton crispus L. plant J Fan, J Zhang, HH Ngo, W Guo, X Yin Bioresource Technology 218, 1257-1260, 2016 | 51 | 2016 |
| Rapid absolute quantification of pathogens and ARGs by nanopore sequencing Y Yang, Y Che, L Liu, C Wang, X Yin, Y Deng, C Yang, T Zhang Science of The Total Environment 809, 152190, 2022 | 42 | 2022 |
Tong Zhang (HKU)Chair Professor, The University of Hong KongEmail yang diverifikasi di hku.hk