| MDAnalysis: a Python package for the rapid analysis of molecular dynamics simulations RJ Gowers, M Linke, J Barnoud, TJE Reddy, MN Melo, SL Seyler, ... Los Alamos National Laboratory (LANL), Los Alamos, NM (United States), 2019 | 1483 | 2019 |
| Martini 3: a general purpose force field for coarse-grained molecular dynamics PCT Souza, R Alessandri, J Barnoud, S Thallmair, I Faustino, ... Nature methods 18 (4), 382-388, 2021 | 921 | 2021 |
| Lipidbook: a public repository for force-field parameters used in membrane simulations J Domański, PJ Stansfeld, MSP Sansom, O Beckstein The Journal of membrane biology 236, 255-258, 2010 | 181 | 2010 |
| Transmembrane helices can induce domain formation in crowded model membranes J Domański, SJ Marrink, LV Schäfer Biochimica et Biophysica Acta (BBA)-Biomembranes 1818 (4), 984-994, 2012 | 141 | 2012 |
| Convergence and Sampling in Determining Free Energy Landscapes for Membrane Protein Association J Domanski, G Hedger, R Best, S PJ, M Sansom J Phys Chem B, 2016 | 102 | 2016 |
| Proceedings of the 15th python in science conference RJ Gowers, M Linke, J Barnoud, TJE Reddy, MN Melo, SL Seyler, ... Austin, TX, 2016 | 72 | 2016 |
| Lipid-loving ANTs: molecular simulations of cardiolipin interactions and the organization of the adenine nucleotide translocase in model mitochondrial membranes G Hedger, SL Rouse, J Domański, M Chavent, H Koldsø, MSP Sansom Biochemistry 55 (45), 6238-6249, 2016 | 66 | 2016 |
| Multiple lipid binding sites determine the affinity of PH domains for phosphoinositide-containing membranes E Yamamoto, J Domański, FB Naughton, RB Best, AC Kalli, PJ Stansfeld, ... Science advances 6 (8), eaay5736, 2020 | 53 | 2020 |
| Balancing force field protein–lipid interactions to capture transmembrane helix–helix association J Domanski, MSP Sansom, PJ Stansfeld, RB Best Journal of chemical theory and computation 14 (3), 1706-1715, 2018 | 48 | 2018 |
| Interactions of the EphA2 kinase domain with PIPs in membranes: implications for receptor function M Chavent, D Karia, AC Kalli, J Domański, AL Duncan, G Hedger, ... Structure 26 (7), 1025-1034. e2, 2018 | 42 | 2018 |
| MDAnalysis: A Python Package for the Rapid Analysis of Molecular Dynamics Simulations, 2016 RJ Gowers, M Linke, J Barnoud, T Reddy, M Melo, S Seyler, J Domański, ... Los Alamos National Lab.(LANL), Los Alamos, NM (United States), 2020 | 27 | 2020 |
| MDAnalysis: A Python Package for the Rapid Analysis of Molecular Dynamics Simulations; Austin, Texas, 2016 R Gowers, M Linke, J Barnoud, T Reddy, M Melo, S Seyler, J Domański, ... There is no corresponding record for this reference, 98-105, 0 | 23 | |
| Ligandbook - an online repository for small and drug-like molecule force field parameters. J Domanski, O Beckstein, B Iorga Bioinformatics, 2017 | 20 | 2017 |
| Atomistic mechanism of transmembrane helix association J Domański, MSP Sansom, PJ Stansfeld, RB Best PLoS computational biology 16 (6), e1007919, 2020 | 17 | 2020 |
| Structural propensity database of proteins K Tamiola, MM Heberling, J Domanski bioRxiv, 144840, 2017 | 1 | 2017 |
| Capturing the association of transmembrane helices in molecular simulations J Domanski, P Stansfeld, M Sansom, R Best ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 257, 2019 | | 2019 |
| Mechanism of Assembly of a Transmembrane Helix Dimer from All-Atom Simulation RB Best, J Domanski, MSP Sansom, P Stansfeld Biophysical Journal 114 (3), 244a-245a, 2018 | | 2018 |
| Molecular simulations of cardiolipin interactions with the adenine nucleotide translocase G Hedger, SL Rouse, J Domanski, M Chavent, H Koldso, MSP Sansom EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 46, S287-S287, 2017 | | 2017 |
| Energetics of protein interactions in the membrane via computer simulations J Domanski University of Oxford, 2017 | | 2017 |
| Membrane protein folding via computer simulations J Domanski, P Stansfeld, M Sansom, R Best ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 251, 2016 | | 2016 |