Denis Thieffry

Dikutip oleh

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Claudine ChaouiyaI2M UMR 7373, Aix Marseille University (France)Email yang diverifikasi di univ-amu.fr
Aurélien NaldiInria, FranceEmail yang diverifikasi di inria.fr
THOMAS-CHOLLIER Morganeassociate professor, Ecole Normale Supérieure ParisEmail yang diverifikasi di biologie.ens.fr
Elisabeth RemyDirectrice de Recherche, CNRS, Aix-Marseille UniversitéEmail yang diverifikasi di univ-amu.fr
Jacques van HeldenAix-Marseille UniversitéEmail yang diverifikasi di univ-amu.fr
Céline HernandezI2BC / CEA - CNRS - UPSaclayEmail yang diverifikasi di i2bc.paris-saclay.fr
Wassim Abou-JaoudéCo-founder at GencoveryEmail yang diverifikasi di gencovery.com
Pedro T. MonteiroINESC-ID / IST - Universidade de LisboaEmail yang diverifikasi di tecnico.ulisboa.pt
Samuel CollombetEikon TherapeuticsEmail yang diverifikasi di eikontx.com
Alejandra Medina-RiveraLaboratorio Internacional de Investigación sobre el Genoma Humano, Universidad Nacional Autónoma deEmail yang diverifikasi di liigh.unam.mx
Laurence CalzoneInstitut CurieEmail yang diverifikasi di curie.fr
Adrien FauréYamaguchi UniversityEmail yang diverifikasi di yamaguchi-u.ac.jp
Julio Collado-VidesProfessor of Computational Genomics, CCG, UNAMEmail yang diverifikasi di ccg.unam.mx
Carl HerrmannProfessor of Bioinformatics - IPMB - Heidelberg UniversityEmail yang diverifikasi di uni-heidelberg.de
Tomas HelikarEberhard Professor, Department of Biochemistry, University of Nebraska - LincolnEmail yang diverifikasi di unl.edu
Thomas GrafCenter for Genomic Regulation, CRGEmail yang diverifikasi di crg.eu
Matthieu DefranceUniversité Libre de BruxellesEmail yang diverifikasi di ulb.be
José Luis Sardina OrtegaJosep Carreras Leukaemia Research InstituteEmail yang diverifikasi di carrerasresearch.org
Hidde de JongINRIAEmail yang diverifikasi di inria.fr
Bruno Contreras-MoreiraSpanish National Research Council, Estación Experimental de Aula DeiEmail yang diverifikasi di eead.csic.es

Ikuti

Denis Thieffry

Professor of Systems Biology, Institut de Biologie de l'Ecole Normale Supérieure (IBENS), Paris

Email yang diverifikasi di ens.fr

computational systems biology bioinformatics gene regulatory networks Boolean networks history of biology


Judul Urutkan menurut kutipan Urutkan menurut tahun Urutkan menurut judul	Dikutip oleh Dikutip oleh	Tahun
Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle A Fauré, A Naldi, C Chaouiya, D Thieffry Bioinformatics 22 (14), e124-e131, 2006	783	2006
Dynamical behaviour of biological regulatory networks—I. Biological role of feedback loops and practical use of the concept of the loop-characteristic state R Thomas, D Thieffry, M Kaufman Bulletin of mathematical biology 57, 247-276, 1995	720	1995
From specific gene regulation to genomic networks: a global analysis of transcriptional regulation in Escherichia coli D Thieffry, AM Huerta, E Pérez‐Rueda, J Collado‐Vides Bioessays 20 (5), 433-440, 1998	662	1998
GOToolBox: functional analysis of gene datasets based on Gene Ontology D Martin, C Brun, E Remy, P Mouren, D Thieffry, B Jacq Genome biology 5, 1-8, 2004	470	2004
Genetic control of flower morphogenesis in Arabidopsis thaliana: a logical analysis. L Mendoza, D Thieffry, ER Alvarez-Buylla Bioinformatics (Oxford, England) 15 (7), 593-606, 1999	420	1999
Dynamical behaviour of biological regulatory networks—II. Immunity control in bacteriophage lambda D Thieffry, R Thomas Bulletin of mathematical biology 57, 277-297, 1995	358	1995
RSAT 2011: regulatory sequence analysis tools M Thomas-Chollier, M Defrance, A Medina-Rivera, O Sand, C Herrmann, ... Nucleic acids research 39 (suppl_2), W86-W91, 2011	297	2011
A logical analysis of the Drosophila gap-gene system L Sánchez, D Thieffry Journal of theoretical Biology 211 (2), 115-141, 2001	295	2001
RSAT 2015: regulatory sequence analysis tools A Medina-Rivera, M Defrance, O Sand, C Herrmann, ... Nucleic acids research 43 (W1), W50-W56, 2015	287	2015
RSAT peak-motifs: motif analysis in full-size ChIP-seq datasets M Thomas-Chollier, C Herrmann, M Defrance, O Sand, D Thieffry, ... Nucleic acids research 40 (4), e31-e31, 2012	275	2012
Logical modeling and dynamical analysis of cellular networks W Abou-Jaoudé, P Traynard, PT Monteiro, J Saez-Rodriguez, T Helikar, ... Frontiers in genetics 7, 94, 2016	257	2016
SBML Level 3: an extensible format for the exchange and reuse of biological models SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ... Molecular systems biology 16 (8), e9110, 2020	255	2020
Graphic requirements for multistability and attractive cycles in a Boolean dynamical framework É Remy, P Ruet, D Thieffry Advances in Applied Mathematics 41 (3), 335-350, 2008	253	2008
C/EBPα poises B cells for rapid reprogramming into induced pluripotent stem cells B Di Stefano, JL Sardina, C van Oevelen, S Collombet, EM Kallin, ... Nature 506 (7487), 235-239, 2014	247	2014
Modeling ERBB receptor-regulated G1/S transition to find novel targets for de novo trastuzumab resistance Ö Sahin, H Fröhlich, C Löbke, U Korf, S Burmester, M Majety, J Mattern, ... BMC systems biology 3, 1-20, 2009	246	2009
RegulonDB: A database on transcriptional regulation in Escherichia coli AM Huerta, H Salgado, D Thieffry, J Collado-Vides Nucleic acids research 26 (1), 55-59, 1998	246	1998
Transcription factors drive Tet2-mediated enhancer demethylation to reprogram cell fate JL Sardina, S Collombet, TV Tian, A Gómez, B Di Stefano, C Berenguer, ... Cell stem cell 23 (5), 727-741. e9, 2018	244	2018
Mathematical modelling of cell-fate decision in response to death receptor engagement L Calzone, L Tournier, S Fourquet, D Thieffry, B Zhivotovsky, E Barillot, ... PLoS computational biology 6 (3), e1000702, 2010	239	2010
GINsim: a software suite for the qualitative modelling, simulation and analysis of regulatory networks AG Gonzalez, A Naldi, L Sanchez, D Thieffry, C Chaouiya Biosystems 84 (2), 91-100, 2006	236	2006
Logical modelling of regulatory networks with GINsim 2.3 A Naldi, D Berenguier, A Fauré, F Lopez, D Thieffry, C Chaouiya Biosystems 97 (2), 134-139, 2009	225	2009

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