Artikel dengan mandat akses publik - Joshua OrvisPelajari lebih lanjut
Tersedia di suatu tempat: 39
Structure, function and diversity of the healthy human microbiome
nature 486 (7402), 207-214, 2012
Mandat: US National Institutes of Health, Howard Hughes Medical Institute, Research …
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
BJ Haas, A Papanicolaou, M Yassour, M Grabherr, PD Blood, J Bowden, ...
Nature protocols 8 (8), 1494-1512, 2013
Mandat: US National Institutes of Health, Howard Hughes Medical Institute, Research …
Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments
BJ Haas, SL Salzberg, W Zhu, M Pertea, JE Allen, J Orvis, O White, ...
Genome biology 9, 1-22, 2008
Mandat: US National Institutes of Health
A framework for human microbiome research
nature 486 (7402), 215-221, 2012
Mandat: US National Institutes of Health, Howard Hughes Medical Institute, Research …
Strains, functions and dynamics in the expanded Human Microbiome Project
J Lloyd-Price, A Mahurkar, G Rahnavard, J Crabtree, J Orvis, AB Hall, ...
Nature 550 (7674), 61-66, 2017
Mandat: US National Institutes of Health
A catalog of reference genomes from the human microbiome
Human Microbiome Jumpstart Reference Strains Consortium, KE Nelson, ...
Science 328 (5981), 994-999, 2010
Mandat: US National Institutes of Health, Research Foundation (Flanders), Canadian …
Draft genome sequence of the oilseed species Ricinus communis
AP Chan, J Crabtree, Q Zhao, H Lorenzi, J Orvis, D Puiu, ...
Nature biotechnology 28 (9), 951-956, 2010
Mandat: US National Institutes of Health
Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus
ND Fedorova, N Khaldi, VS Joardar, R Maiti, P Amedeo, MJ Anderson, ...
PLoS genetics 4 (4), e1000046, 2008
Mandat: US National Institutes of Health
Comparative cellular analysis of motor cortex in human, marmoset and mouse
TE Bakken, NL Jorstad, Q Hu, BB Lake, W Tian, BE Kalmbach, M Crow, ...
Nature 598 (7879), 111-119, 2021
Mandat: US National Science Foundation, US National Institutes of Health, Howard …
A multimodal cell census and atlas of the mammalian primary motor cortex
Principal manuscript editors, Analysis coordination, ...
Nature 598 (7879), 86-102, 2021
Mandat: US National Institutes of Health, Howard Hughes Medical Institute, National …
The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations
GC Cerqueira, MB Arnaud, DO Inglis, MS Skrzypek, G Binkley, M Simison, ...
Nucleic acids research 42 (D1), D705-D710, 2014
Mandat: US National Institutes of Health
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
Z Yao, H Liu, F Xie, S Fischer, RS Adkins, AI Aldridge, SA Ament, ...
Nature 598 (7879), 103-110, 2021
Mandat: US National Institutes of Health
Characterization of the development of the mouse cochlear epithelium at the single cell level
L Kolla, MC Kelly, ZF Mann, A Anaya-Rocha, K Ellis, A Lemons, ...
Nature communications 11 (1), 2389, 2020
Mandat: US National Institutes of Health
The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources
MB Arnaud, GC Cerqueira, DO Inglis, MS Skrzypek, J Binkley, ...
Nucleic acids research 40 (D1), D653-D659, 2012
Mandat: US National Institutes of Health
The Aspergillus Genome Database, a curated comparative genomics resource for gene, protein and sequence information for the Aspergillus research community
MB Arnaud, MC Chibucos, MC Costanzo, J Crabtree, DO Inglis, A Lotia, ...
Nucleic acids research 38 (suppl_1), D420-D427, 2010
Mandat: US National Institutes of Health
An integrated genomic and transcriptomic survey of mucormycosis-causing fungi
MC Chibucos, S Soliman, T Gebremariam, H Lee, S Daugherty, J Orvis, ...
Nature communications 7 (1), 12218, 2016
Mandat: US National Institutes of Health
gEAR: Gene Expression Analysis Resource portal for community-driven, multi-omic data exploration
J Orvis, B Gottfried, J Kancherla, RS Adkins, Y Song, AA Dror, D Olley, ...
Nature methods 18 (8), 843-844, 2021
Mandat: US National Institutes of Health
The IGS standard operating procedure for automated prokaryotic annotation
K Galens, J Orvis, S Daugherty, HH Creasy, S Angiuoli, O White, ...
Standards in genomic sciences 4, 244-251, 2011
Mandat: US National Institutes of Health
Ergatis: a web interface and scalable software system for bioinformatics workflows
J Orvis, J Crabtree, K Galens, A Gussman, JM Inman, E Lee, S Nampally, ...
Bioinformatics 26 (12), 1488-1492, 2010
Mandat: US National Institutes of Health
Genome-wide diversity and gene expression profiling of Babesia microti isolates identify polymorphic genes that mediate host-pathogen interactions
JC Silva, E Cornillot, C McCracken, S Usmani-Brown, A Dwivedi, ...
Scientific reports 6 (1), 35284, 2016
Mandat: Bill & Melinda Gates Foundation, US National Institutes of Health
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