Charlotte Soneson

Dikutip oleh

	Semua	Sejak 2020
Kutipan	17968	13292
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Akses publik

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61 artikel

4 artikel

tersedia

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Berdasarkan pada mandat pendanaan

Pengarang bersama

Mark D. RobinsonFull Professor of Statistical Genomics, University of ZurichEmail yang diverifikasi di mls.uzh.ch
Mauro DelorenziSIB Swiss Institute of BioinformaticsEmail yang diverifikasi di unil.ch
Michael I. LoveAssociate Professor, Biostatistics & Genetics, UNC-Chapel HillEmail yang diverifikasi di email.unc.edu
Rob PatroAssociate Professor, Department of Computer Science, University of MarylandEmail yang diverifikasi di cs.umd.edu
Magnus FontesGeneral Manager Institut Roche, Professor of Mathematics, Lund UniversityEmail yang diverifikasi di roche.com
Helena L. CrowellPostdoc - CNAG, Barcelona, SpainEmail yang diverifikasi di cnag.eu
Kevin RUE-ALBRECHTOxford UniversityEmail yang diverifikasi di imm.ox.ac.uk
Davide RissoDepartment of Statistical Sciences, University of Padova, ItalyEmail yang diverifikasi di unipd.it
Koen Van den BergeJ&J Innovative MedicineEmail yang diverifikasi di berkeley.edu
Lieven ClementAssociate Professor in Statistical Genomics, Ghent UniversityEmail yang diverifikasi di ugent.be
Stephanie C. HicksAssociate Professor, Johns Hopkins Bloomberg School of Public HealthEmail yang diverifikasi di jhu.edu
Michael B. StadlerHead of Computational Biology, Friedrich Miescher Institute for Biomedical Research, SwitzerlandEmail yang diverifikasi di fmi.ch
Federico MariniBioinformatics Group Leader@Institute of Medical Biostatistics, Epidemiology and Informatics (IMBEI)Email yang diverifikasi di uni-mainz.de
Aaron LunGenentech, Inc.Email yang diverifikasi di gene.com
Raphael GottardoLausanne University Hospital and University of LausanneEmail yang diverifikasi di chuv.ch
Wolfgang HuberEMBL - European Molecular Biology LaboratoryEmail yang diverifikasi di embl.org
Robert A. Amezquita, PhDSr Computational ImmunologistEmail yang diverifikasi di pfizer.com
Levi WaldronCity University of New York Graduate School of Public Health and Health PolicyEmail yang diverifikasi di sph.cuny.edu
Ludwig GeistlingerCenter for Computational Biomedicine, Harvard Medical SchoolEmail yang diverifikasi di hms.harvard.edu
Lindsay N. CarppFred Hutchinson Cancer Research CenterEmail yang diverifikasi di fredhutch.org

Ikuti

Charlotte Soneson

Research Associate, FMI, Basel

Email yang diverifikasi di fmi.ch - Beranda


Judul Urutkan menurut kutipan Urutkan menurut tahun Urutkan menurut judul	Dikutip oleh Dikutip oleh	Tahun
The consensus molecular subtypes of colorectal cancer J Guinney, R Dienstmann, X Wang, A De Reynies, A Schlicker, ... Nature medicine 21 (11), 1350-1356, 2015	5071	2015
Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences C Soneson, MI Love, MD Robinson F1000Research 4, 1521, 2016	4172	2016
A comparison of methods for differential expression analysis of RNA-seq data C Soneson, M Delorenzi BMC bioinformatics 14, 1-18, 2013	1151	2013
Orchestrating single-cell analysis with Bioconductor RA Amezquita, ATL Lun, E Becht, VJ Carey, LN Carpp, L Geistlinger, ... Nature methods 17 (2), 137-145, 2020	797	2020
Bias, robustness and scalability in single-cell differential expression analysis C Soneson, MD Robinson Nature methods 15 (4), 255-261, 2018	751	2018
Distal and proximal colon cancers differ in terms of molecular, pathological, and clinical features E Missiaglia, B Jacobs, G D'ario, AF Di Narzo, C Soneson, E Budinska, ... Annals of oncology 25 (10), 1995-2001, 2014	710	2014
A systematic performance evaluation of clustering methods for single-cell RNA-seq data A Duò, MD Robinson, C Soneson F1000Research 7, 1141, 2020	378	2020
Serum neurofilament light chain in early relapsing remitting MS is increased and correlates with CSF levels and with MRI measures of disease severity J Kuhle, C Barro, G Disanto, A Mathias, C Soneson, G Bonnier, Ö Yaldizli, ... Multiple Sclerosis Journal 22 (12), 1550-1559, 2016	290	2016
Tximeta: Reference sequence checksums for provenance identification in RNA-seq MI Love, C Soneson, PF Hickey, LK Johnson, NT Pierce, L Shepherd, ... PLoS computational biology 16 (2), e1007664, 2020	265	2020
muscat detects subpopulation-specific state transitions from multi-sample multi-condition single-cell transcriptomics data HL Crowell, C Soneson, PL Germain, D Calini, L Collin, C Raposo, ... Nature communications 11 (1), 6077, 2020	250	2020
A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes C Soneson, Y Yao, A Bratus-Neuenschwander, A Patrignani, ... Nature communications 10 (1), 3359, 2019	243	2019
Long-lasting stem cell–like memory CD8⁺ T cells with a naïve-like profile upon yellow fever vaccination SA Fuertes Marraco, C Soneson, L Cagnon, PO Gannon, M Allard, ... Science translational medicine 7 (282), 282ra48-282ra48, 2015	221	2015
Observation weights unlock bulk RNA-seq tools for zero inflation and single-cell applications K Van den Berge, F Perraudeau, C Soneson, MI Love, D Risso, JP Vert, ... Genome biology 19, 1-17, 2018	219	2018
diffcyt: Differential discovery in high-dimensional cytometry via high-resolution clustering LM Weber, M Nowicka, C Soneson, MD Robinson Communications biology 2 (1), 183, 2019	218	2019
Alignment and mapping methodology influence transcript abundance estimation A Srivastava, L Malik, H Sarkar, M Zakeri, F Almodaresi, C Soneson, ... Genome biology 21, 1-29, 2020	180	2020
Essential guidelines for computational method benchmarking LM Weber, W Saelens, R Cannoodt, C Soneson, A Hapfelmeier, ... Genome biology 20, 1-12, 2019	172	2019
RNA sequencing data: hitchhiker's guide to expression analysis K Van den Berge, KM Hembach, C Soneson, S Tiberi, L Clement, MI Love, ... Annual Review of Biomedical Data Science 2 (1), 139-173, 2019	165	2019
Isoform prefiltering improves performance of count-based methods for analysis of differential transcript usage C Soneson, KL Matthes, M Nowicka, CW Law, MD Robinson Genome biology 17, 1-15, 2016	156	2016
Swimming downstream: statistical analysis of differential transcript usage following Salmon quantification MI Love, C Soneson, R Patro F1000Research 7, 2018	141	2018
Modulation of mTOR signalling triggers the formation of stem cell-like memory T cells G Scholz, C Jandus, L Zhang, C Grandclément, IC Lopez-Mejia, ... EBioMedicine 4, 50-61, 2016	123	2016

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