Bruno Contreras-Moreira

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64 artikel

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Pablo VinuesaProfessor of Environmental and Evolutionary Microbiology, Center for Genomic Sciences - UNAM, MexicoEmail yang diverifikasi di ccg.unam.mx
Ana Maria CasasGenetics and Plant Production Department, Estación Experimental de Aula Dei (EEAD-CSIC)Email yang diverifikasi di eead.csic.es
Ernesto IgartuaCSICEmail yang diverifikasi di eead.csic.es
Carlos P CantalapiedraCentro de Biotecnología y Genómica de Plantas - UPM-INIAEmail yang diverifikasi di inia.csic.es
Jacques van HeldenAix-Marseille UniversitéEmail yang diverifikasi di univ-amu.fr
Paul A BatesThe Francis Crick InstituteEmail yang diverifikasi di crick.ac.uk
Julio Collado-VidesProfessor of Computational Genomics, CCG, UNAMEmail yang diverifikasi di ccg.unam.mx
Alvaro SebastianBioinformaticianEmail yang diverifikasi di amu.edu.pl
Najla KsouriEstación Experimental Aula Dei EEAD-CSICEmail yang diverifikasi di eead.csic.es
Rubén SanchoEstación Experimental de Aula Dei-CSICEmail yang diverifikasi di eead.csic.es
Y GogorcenaGenomics of fruit trees and grapevines Lab. Pomology Department, EEAD-CSIC, Zaragoza (Spain)Email yang diverifikasi di eead.csic.es
Pilar CatalanUniversidad de ZaragozaEmail yang diverifikasi di unizar.es
Inmaculada Yruela (ORCID: 0000-000...Estación Experimental de Aula Dei, National Spanish Research Council (CSIC)Email yang diverifikasi di eead.csic.es
Sean Patrick GordonGuardant HealthEmail yang diverifikasi di lbl.gov
John P VogelDOE Joint Genome InstituteEmail yang diverifikasi di lbl.gov
Vladimir Espinosa AngaricaSenior Research Fellow at DUKE-NUS Medical School, National University of SingaporeEmail yang diverifikasi di duke-nus.edu.sg
Christian DubosResearcher (INRA - BPMP Montpellier)Email yang diverifikasi di supagro.inra.fr
Alfonso ValenciaICREA Professor. Barcelona Supercomputing Center.Email yang diverifikasi di bsc.es
Reinhard HehlInstitut für Genetik, Technische Universität BraunschweigEmail yang diverifikasi di tu-bs.de

Ikuti

Bruno Contreras-Moreira

Spanish National Research Council, Estación Experimental de Aula Dei

Email yang diverifikasi di eead.csic.es - Beranda

genomics plant breeding regulation structural bioinformatics


Judul Urutkan menurut kutipan Urutkan menurut tahun Urutkan menurut judul	Dikutip oleh Dikutip oleh	Tahun
GET_HOMOLOGUES, a versatile software package for scalable and robust microbial pangenome analysis B Contreras-Moreira, P Vinuesa Applied and environmental microbiology 79 (24), 7696-7701, 2013	909	2013
RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation S Gama-Castro, V Jiménez-Jacinto, M Peralta-Gil, A Santos-Zavaleta, ... Nucleic acids research 36 (suppl_1), D120-D124, 2008	632	2008
Ensembl Genomes 2020—enabling non-vertebrate genomic research KL Howe, B Contreras-Moreira, N De Silva, G Maslen, W Akanni, J Allen, ... Nucleic acids research 48 (D1), D689-D695, 2020	465	2020
Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure SP Gordon, B Contreras-Moreira, DP Woods, DL Des Marais, D Burgess, ... Nature communications 8 (1), 2184, 2017	335	2017
Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in E. coli A Mendoza-Vargas, L Olvera, M Olvera, R Grande, L Vega-Alvarado, ... PloS one 4 (10), e7526, 2009	313	2009
RSAT 2015: regulatory sequence analysis tools A Medina-Rivera, M Defrance, O Sand, C Herrmann, ... Nucleic acids research 43 (W1), W50-W56, 2015	288	2015
Ensembl Genomes 2022: an expanding genome resource for non-vertebrates AD Yates, J Allen, RM Amode, AG Azov, M Barba, A Becerra, J Bhai, ... Nucleic acids research 50 (D1), D996-D1003, 2022	254	2022
OPCML at 11q25 is epigenetically inactivated and has tumor-suppressor function in epithelial ovarian cancer GC Sellar, KP Watt, GJ Rabiasz, EA Stronach, L Li, EP Miller, CE Massie, ... Nature genetics 34 (3), 337-343, 2003	246	2003
Domain fishing: a first step in protein comparative modelling B Contreras-Moreira, PA Bates Bioinformatics 18 (8), 1141-1142, 2002	214	2002
RSAT 2018: regulatory sequence analysis tools 20th anniversary NTT Nguyen, B Contreras-Moreira, JA Castro-Mondragon, ... Nucleic acids research 46 (W1), W209-W214, 2018	212	2018
Multilocus Sequence Analysis for Assessment of the Biogeography and Evolutionary Genetics of Four Bradyrhizobium Species That Nodulate Soybeans on the … P Vinuesa, K Rojas-Jiménez, B Contreras-Moreira, SK Mahna, BN Prasad, ... Applied and environmental microbiology 74 (22), 6987-6996, 2008	212	2008
GET_PHYLOMARKERS, a software package to select optimal orthologous clusters for phylogenomics and inferring pan-genome phylogenies, used for a critical geno-taxonomic revision … P Vinuesa, LE Ochoa-Sánchez, B Contreras-Moreira Frontiers in microbiology 9, 771, 2018	147	2018
BARLEYMAP: physical and genetic mapping of nucleotide sequences and annotation of surrounding loci in barley CP Cantalapiedra, R Boudiar, AM Casas, E Igartua, B Contreras-Moreira Molecular breeding 35, 1-11, 2015	115	2015
Gramene 2021: harnessing the power of comparative genomics and pathways for plant research MK Tello-Ruiz, S Naithani, P Gupta, A Olson, S Wei, J Preece, Y Jiao, ... Nucleic Acids Research 49 (D1), D1452-D1463, 2021	109	2021
A roadmap for gene functional characterisation in crops with large genomes: lessons from polyploid wheat NM Adamski, P Borrill, J Brinton, SA Harrington, C Marchal, AR Bentley, ... Elife 9, e55646, 2020	104	2020
Analysis of plant pan-genomes and transcriptomes with GET_HOMOLOGUES-EST, a clustering solution for sequences of the same species B Contreras-Moreira, CP Cantalapiedra, MJ García-Pereira, SP Gordon, ... Frontiers in plant science 8, 184, 2017	98	2017
Comparative plastome genomics and phylogenomics of Brachypodium: flowering time signatures, introgression and recombination in recently diverged ecotypes R Sancho, CP Cantalapiedra, D López‐Alvarez, SP Gordon, JP Vogel, ... New Phytologist 218 (4), 1631-1644, 2018	93	2018
OsRMC, a negative regulator of salt stress response in rice, is regulated by two AP2/ERF transcription factors TS Serra, DD Figueiredo, AM Cordeiro, DM Almeida, T Lourenço, ... Plant Molecular Biology 82, 439-455, 2013	93	2013
3D-footprint: a database for the structural analysis of protein–DNA complexes B Contreras-Moreira Nucleic acids research 38 (suppl_1), D91-D97, 2010	89	2010
Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors SP Gordon, B Contreras-Moreira, JJ Levy, A Djamei, A Czedik-Eysenberg, ... Nature communications 11 (1), 3670, 2020	88	2020

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