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Raktim Mitra
Raktim Mitra
Institute for Protein Design, University of Washington
Email verificata su uw.edu
Titolo
Citata da
Citata da
Anno
RVAgene: generative modeling of gene expression time series data
R Mitra, AL MacLean
Bioinformatics 37 (19), 3252-3262, 2021
182021
Geometric deep learning of protein–DNA binding specificity
R Mitra, J Li, JM Sagendorf, Y Jiang, AS Cohen, TP Chiu, CJ Glasscock, ...
Nature Methods 21 (9), 1674-1683, 2024
112024
Tejaas: reverse regression increases power for detecting trans-eQTLs
S Banerjee, FL Simonetti, KE Detrois, A Kaphle, R Mitra, R Nagial, ...
Genome biology 22 (1), 142, 2021
72021
Structure-based prediction of protein-nucleic acid binding using graph neural networks
JM Sagendorf, R Mitra, J Huang, XS Chen, R Rohs
Biophysical Reviews 16 (3), 297-314, 2024
42024
Reverse regression increases power for detecting trans-eQTLs
S Banerjee, FL Simonetti, KE Detrois, A Kaphle, R Mitra, R Nagial, ...
bioRxiv, 2020.05. 07.083386, 2020
42020
Probing the role of the protonation state of a minor groove-linker histidine in Exd-Hox–DNA binding
Y Jiang, TP Chiu, R Mitra, R Rohs
Biophysical Journal 123 (2), 248-259, 2024
32024
RNAscape: geometric mapping and customizable visualization of RNA structure
R Mitra, AS Cohen, R Rohs
Nucleic Acids Research, gkae269, 2024
22024
DNAproDB: an updated database for the automated and interactive analysis of protein–DNA complexes
R Mitra, AS Cohen, JM Sagendorf, HM Berman, R Rohs
Nucleic Acids Research 53 (D1), D396-D402, 2025
2025
PNAbind: Structure-based prediction of protein-nucleic acid binding using graph neural networks
JM Sagendorf, R Mitra, J Huang, XS Chen, R Rohs
bioRxiv, 2024.02. 27.582387, 2024
2024
DeepPBS: Geometric deep learning for interpretable prediction of protein-DNA binding specificity
R Mitra, J Li, JM Sagendorf, Y Jiang, TP Chiu, R Rohs
bioRxiv, 2023.12. 15.571942, 2023
2023
Il sistema al momento non può eseguire l'operazione. Riprova più tardi.
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