| Global phylogeography and ancient evolution of the widespread human gut virus crAssphage RA Edwards, AA Vega, HM Norman, M Ohaeri, K Levi, EA Dinsdale, ... Nature microbiology 4 (10), 1727-1736, 2019 | 235 | 2019 |
| Nearshore Pelagic Microbial Community Abundance Affects Recruitment Success of Giant Kelp, Macrocystis pyrifera MM Morris, JM Haggerty, BN Papudeshi, AA Vega, MS Edwards, ... Frontiers in microbiology 7, 1800, 2016 | 32 | 2016 |
| Global phylogeography and ancient evolution of the widespread human gut virus crAssphage. Nat Microbiol 4: 1727–1736 RA Edwards, AA Vega, HM Norman, M Ohaeri, K Levi, EA Dinsdale, ... | 22 | 2019 |
| Mitochondrial recovery from shotgun metagenome sequencing enabling phylogenetic analysis of the common thresher shark (Alopias vulpinus) MP Doane, D Kacev, S Harrington, K Levi, D Pande, A Vega, EA Dinsdale Meta Gene 15, 10-15, 2018 | 18 | 2018 |
| Host interactions of novel Crassvirales species belonging to multiple families infecting bacterial host, Bacteroides cellulosilyticus WH2 B Papudeshi, AA Vega, C Souza, SK Giles, V Mallawaarachchi, ... Microbial Genomics 9 (9), 001100, 2023 | 9 | 2023 |
| Compounding Achromobacter Phages for Therapeutic Applications AG Cobián Güemes, T Le, MI Rojas, NE Jacobson, H Villela, K McNair, ... Viruses 15 (8), 1665, 2023 | 7 | 2023 |
| Novel crAssphage isolates exhibit conserved gene order and purifying selection of the host specificity protein B Papudeshi, AA Vega, C Souza, SK Giles, V Mallawaarachchi, ... bioRxiv, 2023 | 2 | 2023 |
| Draft genomes of 12 Bifidobacterium isolates from human IBD fecal samples CE Souza, NE Jacobson, MA An, L Droit, AA Vega, M Rosales, ... Microbiology Resource Announcements 13 (1), e00130-23, 2024 | 1 | 2024 |
| Global phylogeography and ancient evolution of the widespread human gut virus crAssphage N Trefault, RA Edwards, AA Vega, HM Norman, M Ohaeri, K Levi, ... NATURE PUBLISHING GROUP, 2019 | 1 | 2019 |
| Sphae: An automated toolkit for predicting phage therapy candidates from sequencing data B Papudeshi, MJ Roach, V Mallawaarachchi, G Bouras, SR Grigson, ... Bioinformatics Advances, vbaf004, 2025 | | 2025 |
| Phage therapy candidates from Sphae: An automated toolkit for predicting sequencing data B Papudeshi, MJ Roach, V Mallawaarachchi, G Bouras, SR Grigson, ... bioRxiv, 2024 | | 2024 |
| Global phylogeography and ancient evolution of the widespread human gut virus crAssphage RA Edwards, AA Vega, HM Norman, M Ohaeri, K Levi, EA Dinsdale, ... Nature Microbiology 4 (10), 1727-1736, 2019 | | 2019 |
