Michael Bada

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Lawrence HunterUniversity of ChicagoEmail verificata su uchicago.edu
William A Baumgartner JrAssistant Professor -- University of Colorado, School of MedicineEmail verificata su ucdenver.edu
Karin VerspoorExecutive Dean, School of Computing Technologies, RMIT UniversityEmail verificata su rmit.edu.au
Russ B AltmanProfessor Stanford UniversityEmail verificata su stanford.edu
Christopher FunkPhD student, University of Colorado Medical SchoolEmail verificata su ucdenver.edu
Judith BlakeProfessor of Mammalian GeneticsEmail verificata su jax.org
Martha Stone PalmerProfessor of Linguistics, Computer Science, University of ColoradoEmail verificata su colorado.edu
Christopher J MungallLawrence Berkeley National LaboratoryEmail verificata su lbl.gov
Robert StevensProfessor of Computer Science, Department of Computer Science, university of manchesterEmail verificata su manchester.ac.uk
Michelle Whirl-CarrilloStanford UniversityEmail verificata su stanford.edu
Jane LomaxSciBiteEmail verificata su scibite.com
Christophe RoederUCDenverEmail verificata su ucdenver.edu
Amelia IrelandUnaffiliatedEmail verificata su gmod.org
Zhiyong LuSenior Investigator, NLM; Adjunct Professor of CS, UIUCEmail verificata su nih.gov
J. Michael CherryStanford University, Department of GeneticsEmail verificata su stanford.edu
Carole GobleProfessor of Computer Science, University of ManchesterEmail verificata su manchester.ac.uk
Yolanda GilResearch Professor of Computer Science, University of Southern CaliforniaEmail verificata su isi.edu
Suzanna LewisLawrence Berkeley National LaboratoryEmail verificata su lbl.gov
Benjamin J. GarciaMassachusetts Institute of TechnologyEmail verificata su ucdenver.edu
Xiaoqian ChaiAssistant Professor, McGill UniversityEmail verificata su mcgill.ca

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Michael Bada

Research Associate, University of Colorado Anschutz Medical Campus

Email verificata su ucdenver.edu

bioinformatics ontologies knowledge representation annotation corpora


Titolo Ordina per citazioni Ordina per anno Ordina per titolo	Citata da Citata da	Anno
Concept annotation in the CRAFT corpus M Bada, M Eckert, D Evans, K Garcia, K Shipley, D Sitnikov, ... BMC bioinformatics 13, 1-20, 2012	318	2012
Cross-product extensions of the Gene Ontology CJ Mungall, M Bada, TZ Berardini, J Deegan, A Ireland, MA Harris, ... Journal of biomedical informatics 44 (1), 80-86, 2011	158	2011
A short study on the success of the Gene Ontology M Bada, R Stevens, C Goble, Y Gil, M Ashburner, JA Blake, JM Cherry, ... Journal of web semantics 1 (2), 235-240, 2004	147	2004
Large-scale biomedical concept recognition: an evaluation of current automatic annotators and their parameters C Funk, W Baumgartner, B Garcia, C Roeder, M Bada, KB Cohen, ... BMC bioinformatics 15, 1-29, 2014	135	2014
RiboWeb: An ontology-based system for collaborative molecular biology RB Altman, M Buda, XJ Chai, MW Carillo, RO Chen, NF Abernethy IEEE Intelligent Systems and Their Applications 14 (5), 68-76, 1999	132	1999
A corpus of full-text journal articles is a robust evaluation tool for revealing differences in performance of biomedical natural language processing tools KM Verspoor, KB Cohen, A Lanfranchi, C Warner, HL Johnson, C Roeder, ... BMC bioinformatics, 2011	130	2011
KaBOB: ontology-based semantic integration of biomedical databases KM Livingston, M Bada, WA Baumgartner, LE Hunter BMC bioinformatics 16, 1-21, 2015	94	2015
Computational modeling of structural experimental data MA Bada, RB Altman Methods in enzymology 317, 470-484, 2000	93	2000
Coreference annotation and resolution in the Colorado Richly Annotated Full Text (CRAFT) corpus of biomedical journal articles KB Cohen, A Lanfranchi, MJ Choi, M Bada, WA Baumgartner, ... BMC bioinformatics 18, 1-14, 2017	73	2017
Quality assurance of medical ontologies JE Rogers Methods of information in medicine 45 (03), 267-274, 2006	73	2006
Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology DP Hill, N Adams, M Bada, C Batchelor, TZ Berardini, H Dietze, ... BMC genomics 14, 1-10, 2013	70	2013
Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science DR Unni, SAT Moxon, M Bada, M Brush, R Bruskiewich, JH Caufield, ... Clinical and translational science 15 (8), 1848-1855, 2022	67	2022
The colorado richly annotated full text (craft) corpus: Multi-model annotation in the biomedical domain KB Cohen, K Verspoor, K Fort, C Funk, M Bada, M Palmer, LE Hunter Handbook of Linguistic annotation, 1379-1394, 2017	59	2017
Evaluation of lexical methods for detecting relationships between concepts from multiple ontologies HL Johnson, KB Cohen, JR WILLIAM A BAUMGARTNER, Z Lu, M Bada, ... Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 28, 2006	55	2006
Enrichment of OBO ontologies M Bada, L Hunter Journal of Biomedical Informatics 40 (3), 300-315, 2007	48	2007
Solution structural studies and low-resolution model of the Schizosaccharomyces pombe sap1 protein M Bada, D Walther, B Arcangioli, S Doniach, M Delarue Journal of Molecular Biology 300 (3), 563-574, 2000	47	2000
Using reasoning to guide annotation with gene ontology terms in GOAT M Bada, D Turi, R McEntire, R Stevens ACM SIGMOD Record 33 (2), 27-32, 2004	45	2004
Mining biochemical information: lessons taught by the ribosome. M Whirl-Carrillo, IS Gabashvili, M Bada, DR Banatao, RB Altman Rna 8 (3), 279-289, 2002	45	2002
An overview of the CRAFT concept annotation guidelines M Bada, M Eckert, M Palmer, L Hunter Proceedings of the Fourth Linguistic Annotation Workshop, 207-211, 2010	36	2010
Progress toward a universal biomedical data translator K Fecho, AE Thessen, SE Baranzini, C Bizon, JJ Hadlock, S Huang, ... Clinical and Translational Science 15 (8), 1838-1847, 2022	30	2022

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