| Advantages and limitations of current network inference methods R De Smet, K Marchal Nature Reviews Microbiology 8 (10), 717-729, 2010 | 620 | 2010 |
| Convergent gene loss following gene and genome duplications creates single-copy families in flowering plants R De Smet, KL Adams, K Vandepoele, MCE Van Montagu, S Maere, ... Proceedings of the National Academy of Sciences, 2013 | 404 | 2013 |
| Gene duplicability of core genes is highly consistent across all angiosperms Z Li, J Defoort, S Tasdighian, S Maere, Y Van de Peer, R De Smet The Plant Cell, 2016 | 228 | 2016 |
| Redundancy and rewiring of genetic networks following genome-wide duplication events R De Smet, Y Van de Peer Current opinion in plant biology 15 (2), 168-176, 2012 | 141 | 2012 |
| MarkerMiner 1.0: A new application for phylogenetic marker development using angiosperm transcriptomes S Chamala, N García, GT Godden, V Krishnakumar, IE Jordon‐Thaden, ... Applications in Plant Sciences 3 (4), 1400115, 2015 | 130 | 2015 |
| Lack of GLYCOLATE OXIDASE1, but not GLYCOLATE OXIDASE2, attenuates the photorespiratory phenotype of CATALASE2-deficient Arabidopsis P Kerchev, C Waszczak, A Lewandowska, P Willems, A Shapiguzov, Z Li, ... Plant Physiology 171 (3), 1704-1719, 2016 | 118 | 2016 |
| Module networks revisited: computational assessment and prioritization of model predictions A Joshi, R De Smet, K Marchal, Y Van de Peer, T Michoel Bioinformatics 25 (4), 490-496, 2009 | 111 | 2009 |
| Comparative analysis of module-based versus direct methods for reverse-engineering transcriptional regulatory networks T Michoel, R De Smet, A Joshi, Y Van de Peer, K Marchal BMC systems biology 3, 1-13, 2009 | 77 | 2009 |
| Coordinated Functional Divergence of Genes after Genome Duplication in Arabidopsis thaliana R De Smet, E Sabaghian, Z Li, Y Saeys, Y Van de Peer The plant cell 29 (11), 2786-2800, 2017 | 61 | 2017 |
| Use of structural DNA properties for the prediction of transcription-factor binding sites in Escherichia coli P Meysman, TH Dang, K Laukens, R De Smet, Y Wu, K Marchal, ... Nucleic acids research 39 (2), e6-e6, 2011 | 55 | 2011 |
| Conservation of nonsense-mediated mRNA decay complex components throughout eukaryotic evolution B Causier, Z Li, R De Smet, JPB Lloyd, Y Van de Peer, B Davies Scientific reports 7 (1), 16692, 2017 | 43 | 2017 |
| COLOMBOS: access port for cross-platform bacterial expression compendia K Engelen, Q Fu, P Meysman, A Sánchez-Rodríguez, R De Smet, ... PLoS One 6 (7), e20938, 2011 | 33 | 2011 |
| Query-based biclustering of gene expression data using Probabilistic Relational Models H Zhao, L Cloots, T Van den Bulcke, Y Wu, R De Smet, V Storms, ... BMC bioinformatics 12, 1-11, 2011 | 26 | 2011 |
| An ensemble biclustering approach for querying gene expression compendia with experimental lists R De Smet, K Marchal Bioinformatics 27 (14), 1948-1956, 2011 | 13 | 2011 |
| Reverse‐Engineering Transcriptional Modules from Gene Expression Data T Michoel, R De Smet, A Joshi, K Marchal, Y Van de Peer Annals of the New York Academy of Sciences 1158 (1), 36-43, 2009 | 7 | 2009 |
| An ensemble method for querying gene expression compendia with experimental lists R De Smet, K Marchal 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2010 | 3 | 2010 |
| LARGE-SCALE BIOLOGY Y Van de Peer, R De Smet | | 2016 |
| Quantifying expression divergence of duplicated genes with microarrays K Van den Berge, R De Smet, Y Van de Peer, L Clement 23rd Annual meeting of the Belgian Statistical Society, 2015 | | 2015 |
| Query-based Biclustering of Gene Expression Data using Probabilistic Relational Models L Cloots, H Zhao, T Van den Bulcke, Y Wu, R De Smet, V Storms, ... Machine Learning in Systems Biology, 119, 2010 | | 2010 |
| Cross-checking experimental results with publicly available gene expression data: a query-driven approach R De Smet, H Sun, K Hermans, K Lemmens, S De Keersmaecker, ... SBNST, Date: 2010/06/16-2010/06/18, Location: Barcelona, 2010 | | 2010 |
Yves Van de PeerProfessor in Bioinformatics and Genome Biology, Ghent University, BelgiumEmail verificata su psb.ugent.be
