A Broad-Host-Range CRISPRi Toolkit for Silencing Gene Expression in Burkholderia AM Hogan, ASMZ Rahman, TJ Lightly, ST Cardona ACS Synthetic Biology 8 (10), 2372-2384, 2019 | 38 | 2019 |
A machine learning model trained on a high-throughput antibacterial screen increases the hit rate of drug discovery ASMZ Rahman, C Liu, H Sturm, AM Hogan, R Davis, P Hu, ST Cardona PLOS Computational Biology 18 (10), e1010613, 2022 | 17 | 2022 |
Deep learning-driven prediction of drug mechanism of action from large-scale chemical-genetic interaction profiles C Liu, AM Hogan, H Sturm, MW Khan, MM Islam, ASMZ Rahman, R Davis, ... Journal of Cheminformatics 14 (1), 12, 2022 | 11 | 2022 |
Profiling cell envelope-antibiotic interactions reveals vulnerabilities to β-lactams in a multidrug-resistant bacterium AM Hogan, ASMZ Rahman, A Motnenko, A Natarajan, DT Maydaniuk, ... Nature Communications 14 (1), 4815, 2023 | 8 | 2023 |
Identification of putative essential protein domains from high-density transposon insertion sequencing ASMZ Rahman, L Timmerman, F Gallardo, ST Cardona Scientific Reports 12 (1), 962, 2022 | 6 | 2022 |
A CRISPR-Cas-associated transposon system for genome editing in Burkholderia cepacia complex species ZL Yap, ASMZ Rahman, AM Hogan, DB Levin, ST Cardona Applied and Environmental Microbiology, e00699-24, 2024 | 3 | 2024 |
High-risk non-synonymous SNPs of human Bcl-2 gene alters structural stability and small molecule binding ASMZ Rahman, A Bhattacharjee, AA Jaber, M Hossain, KN Hasan, ... Bioresearch Communications-(BRC) 6 (1), 791-800, 2020 | 2 | 2020 |
Molecular analysis of hemagglutinin, neuraminidase, matrix genes provide insight into the genetic diversity of seasonal H3N2 human influenza a viruses in Bangladesh during July … M Jain, S Islam, ASMZ Rahman, S Akhtar, KN Hasan, GU Ahsan, ... VirusDisease 29, 54-60, 2018 | 1 | 2018 |
Probing the essential genome of Burkholderia cenocepacia K56-2 with CRISPRi to identify bioactive compounds with novel mechanisms of action (s) ASM Rahman | | 2024 |
Cell envelope structural and functional contributions to antibiotic resistance in Burkholderia cenocepacia AM Hogan, A Motnenko, ASMZ Rahman, ST Cardona Journal of Bacteriology 206 (4), e00441-23, 2024 | | 2024 |
Rationally Designed Pooled CRISPRi-seq Uncovers a Novel Inhibitor of Bacterial Peptidyl-tRNA Hydrolase ASMZ Rahman, EA Syroegin, J Novomisky Nechcoff, L Timmerman, ... bioRxiv, 2024.05. 02.592284, 2024 | | 2024 |
Identification of Essential Protein Domains From High-density Transposon Insertion Sequencing ASMZ Rahman, L Timmerman, F Gallardo, ST Cardona | | 2021 |
Prediction of Antibiotic Activity against Burkholderia cenocepacia Using a Machine Learning Model ASMZ Rahman, C Liu, L Timmerman, A Hogan, R Davis, P Hu, S Cardona MDPI, 2021 | | 2021 |
Isolation and Identification of Industrially Significant Xylanase Producing Bacteria from Environmental Sample ASMZ Rahman North South University, 2016 | | 2016 |
Accelerated degradation of exogenous indole by Burkholderia unamae strain CK43B exposed to pyrogallol-type polyphenols. KDY Kim DongYeop, A Rahman, IR Sitepu, Y Hashidoko | | 2013 |