| Topological structure analysis of the protein–protein interaction network in budding yeast D Bu, Y Zhao, L Cai, H Xue, X Zhu, H Lu, J Zhang, S Sun, L Ling, N Zhang, ... Nucleic acids research 31 (9), 2443-2450, 2003 | 982 | 2003 |
| Global epigenetic and transcriptional trends among two rice subspecies and their reciprocal hybrids G He, X Zhu, AA Elling, L Chen, X Wang, L Guo, M Liang, H He, H Zhang, ... The Plant Cell 22 (1), 17-33, 2010 | 629 | 2010 |
| Evolutionarily conserved multisubunit RBL2/p130 and E2F4 protein complex represses human cell cycle-dependent genes in quiescence L Litovchick, S Sadasivam, L Florens, X Zhu, SK Swanson, S Velmurugan, ... Molecular cell 26 (4), 539-551, 2007 | 476 | 2007 |
| Transcriptional inhibiton of Hoxd4 expression by miRNA-10a in human breast cancer cells Y Tan, B Zhang, T Wu, G Skogerbø, X Zhu, X Guo, S He, R Chen BMC molecular biology 10, 1-9, 2009 | 239 | 2009 |
| Evolutionary analysis across mammals reveals distinct classes of long non-coding RNAs J Chen, AA Shishkin, X Zhu, S Kadri, I Maza, M Guttman, JH Hanna, ... Genome biology 17, 1-17, 2016 | 168 | 2016 |
| Organization of the Caenorhabditis elegans small non-coding transcriptome: genomic features, biogenesis, and expression W Deng, X Zhu, G Skogerbø, Y Zhao, Z Fu, Y Wang, H He, L Cai, H Sun, ... Genome research 16 (1), 20-29, 2006 | 154 | 2006 |
| Model-based analysis of two-color arrays (MA2C) JS Song, WE Johnson, X Zhu, X Zhang, W Li, AK Manrai, JS Liu, R Chen, ... Genome biology 8, 1-13, 2007 | 136 | 2007 |
| NPInter: the noncoding RNAs and protein related biomacromolecules interaction database T Wu, J Wang, C Liu, Y Zhang, B Shi, X Zhu, Z Zhang, G Skogerbø, ... Nucleic acids research 34 (suppl_1), D150-D152, 2006 | 117 | 2006 |
| Genome-wide mapping of human DNA replication by optical replication mapping supports a stochastic model of eukaryotic replication W Wang, KN Klein, K Proesmans, H Yang, C Marchal, X Zhu, T Borrman, ... Molecular cell 81 (14), 2975-2988. e6, 2021 | 99 | 2021 |
| Mapping the C. elegans noncoding transcriptome with a whole-genome tiling microarray H He, J Wang, T Liu, XS Liu, T Li, Y Wang, Z Qian, H Zheng, X Zhu, T Wu, ... Genome research 17 (10), 1471-1477, 2007 | 94 | 2007 |
| MicroRNA-encoding long non-coding RNAs S He, H Su, C Liu, G Skogerbø, H He, D He, X Zhu, T Liu, Y Zhao, R Chen BMC genomics 9, 1-11, 2008 | 76 | 2008 |
| Accurate prediction of transposon-derived piRNAs by integrating various sequential and physicochemical features L Luo, D Li, W Zhang, S Tu, X Zhu, G Tian PloS one 11 (4), e0153268, 2016 | 66 | 2016 |
| The interactome as a tree—an attempt to visualize the protein–protein interaction network in yeast H Lu, X Zhu, H Liu, G Skogerbø, J Zhang, Y Zhang, L Cai, Y Zhao, S Sun, ... Nucleic acids research 32 (16), 4804-4811, 2004 | 62 | 2004 |
| Prediction of structured non‐coding RNAs in the genomes of the nematodes Caenorhabditis elegans and Caenorhabditis briggsae K Missal, X Zhu, D Rose, W Deng, G Skogerbø, R Chen, PF Stadler Journal of Experimental Zoology Part B: Molecular and Developmental …, 2006 | 61 | 2006 |
| Expression analysis of miRNAs and highly‐expressed small RNAs in two rice subspecies and their reciprocal hybrids F Chen, G He, H He, W Chen, X Zhu, M Liang, L Chen, XW Deng Journal of integrative plant biology 52 (11), 971-980, 2010 | 54 | 2010 |
| Profiling Caenorhabditis elegans non-coding RNA expression with a combined microarray H He, L Cai, G Skogerbø, W Deng, T Liu, X Zhu, Y Wang, D Jia, Z Zhang, ... Nucleic acids research 34 (10), 2976-2983, 2006 | 48 | 2006 |
| Phylophenetic properties of metabolic pathway topologies as revealed by global analysis Y Zhang, S Li, G Skogerbø, Z Zhang, X Zhu, Z Zhang, S Sun, H Lu, B Shi, ... BMC bioinformatics 7, 1-13, 2006 | 44 | 2006 |
| Integrated analysis of multiple data sources reveals modular structure of biological networks H Lu, B Shi, G Wu, Y Zhang, X Zhu, Z Zhang, C Liu, Y Zhao, T Wu, J Wang, ... Biochemical and biophysical research communications 345 (1), 302-309, 2006 | 42 | 2006 |
| Systematic identification and characterization of chicken ( Gallus gallus ) ncRNAs Y Zhang, J Wang, S Huang, X Zhu, J Liu, N Yang, D Song, R Wu, W Deng, ... Nucleic acids research 37 (19), 6562-6574, 2009 | 34 | 2009 |
| Date of origin of the SARS coronavirus strains H Lu, Y Zhao, J Zhang, Y Wang, W Li, X Zhu, S Sun, J Xu, L Ling, L Cai, ... BMC Infectious Diseases 4, 1-6, 2004 | 34 | 2004 |
Yi Zhao | 赵屹Institute of Computing Technology, Chinese Academy of SciencesEmail verificata su ict.ac.cn