Dagmar Waltemath

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David Phillip NickersonAuckland Bioengineering Institute, University of AucklandEmail verificata su auckland.ac.nz
Michael HuckaGoogle Quantum AIEmail verificata su google.com
Martin GolebiewskiHITS gGmbH, Heidelberg (Germany)Email verificata su h-its.org
Frank T. BergmannBioQUANT/COS, Heidelberg University, Heidelberg, GermanyEmail verificata su caltech.edu
Chris MyersUniversity of UtahEmail verificata su ece.utah.edu
Martin ScharmHead of IT @ Dept. of Systems Biology and BioinformaticsEmail verificata su binfalse.de
Falk SchreiberProfessor, University of Konstanz and Monash UniversityEmail verificata su uni-konstanz.de
Brett G. OlivierVrije Universiteit AmsterdamEmail verificata su vu.nl
Jonathan CooperUniversity College LondonEmail verificata su ucl.ac.uk
Stefan HoopsResearch Associate Professor, Biocomplexity Institute & Initiative, University of VirginiaEmail verificata su virginia.edu
Herbert M SauroUniversity of WashingtonEmail verificata su u.washington.edu
Andreas DrägerProfessor for Data Analytics and BioinformaticsEmail verificata su informatik.uni-halle.de
Claudine ChaouiyaI2M UMR 7373, Aix Marseille University (France)Email verificata su univ-amu.fr
Padraig GleesonDepartment of Neuroscience, Physiology and Pharmacology, University College LondonEmail verificata su ucl.ac.uk
Gary BaderProfessor of Molecular Genetics and Computer Science, The Donnelly Centre, University of TorontoEmail verificata su utoronto.ca
Darren WilkinsonProfessor of Statistics, Durham University, U.K.Email verificata su durham.ac.uk
Bjorn SommerRoyal College of ArtEmail verificata su rca.ac.uk
Snoep JLStellenbosch University; Manchester University; Vrije Universiteit AmsterdamEmail verificata su sun.ac.za
Nicolas RodriguezSenior Software Systems and Database Architect, Babraham InstituteEmail verificata su babraham.ac.uk
Rahuman S Malik SheriffEMBL-EBI, Cambridge, UKEmail verificata su ebi.ac.uk

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Dagmar Waltemath

Professor of Medical Informatics

Email verificata su uni-greifswald.de - Home page

biomedical research data management data integration


Titolo Ordina per citazioni Ordina per anno Ordina per titolo	Citata da Citata da	Anno
Controlled vocabularies and semantics in systems biology M Courtot, N Juty, C Knupfer, D Waltemath, A Zhukova, A Drager, ... Molecular Systems Biology 7 (543), 2011	344	2011
Reproducible computational biology experiments with SED-ML-the simulation experiment description markup language D Waltemath, R Adams, FT Bergmann, M Hucka, F Kolpakov, AK Miller, ... BMC systems biology 5, 1-10, 2011	306	2011
SBML Level 3: an extensible format for the exchange and reuse of biological models SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ... Molecular systems biology 16 (8), e9110, 2020	252	2020
Minimum information about a simulation experiment (MIASE) D Waltemath, R Adams, DA Beard, FT Bergmann, US Bhalla, R Britten, ... PLoS computational biology 7 (4), e1001122, 2011	174	2011
COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project FT Bergmann, R Adams, S Moodie, J Cooper, M Glont, M Golebiewski, ... BMC bioinformatics 15, 1-9, 2014	167	2014
The systems biology markup language (SBML): language specification for level 3 version 2 core release 2 M Hucka, FT Bergmann, C Chaouiya, A Dräger, S Hoops, SM Keating, ... Journal of integrative bioinformatics 16 (2), 20190021, 2019	116	2019
The systems biology markup language (SBML): language specification for level 3 version 2 core M Hucka, FT Bergmann, A Dräger, S Hoops, SM Keating, N Le Novère, ... Journal of integrative bioinformatics 15 (1), 20170081, 2018	104	2018
Promoting coordinated development of community-based information standards for modeling in biology: the COMBINE initiative M Hucka, DP Nickerson, GD Bader, FT Bergmann, J Cooper, E Demir, ... Frontiers in bioengineering and biotechnology 3, 19, 2015	95	2015
SED-ML–An XML Format for the Implementation of the MIASE Guidelines D Köhn, N Le Novere International Conference on Computational Methods in Systems Biology, 176-190, 2008	79	2008
Harmonizing semantic annotations for computational models in biology ML Neal, M König, D Nickerson, G Mısırlı, R Kalbasi, A Dräger, K Atalag, ... Briefings in bioinformatics 20 (2), 540-550, 2019	75	2019
Combining computational models, semantic annotations and simulation experiments in a graph database R Henkel, O Wolkenhauer, D Waltemath Database 2015, bau130, 2015	66	2015
Toward community standards and software for whole-cell modeling D Waltemath, JR Karr, FT Bergmann, V Chelliah, M Hucka, M Krantz, ... IEEE Transactions on Biomedical Engineering 63 (10), 2007-2014, 2016	65	2016
A call for virtual experiments: accelerating the scientific process J Cooper, JO Vik, D Waltemath Progress in biophysics and molecular biology 117 (1), 99-106, 2015	61	2015
How modeling standards, software, and initiatives support reproducibility in systems biology and systems medicine D Waltemath, O Wolkenhauer IEEE Transactions on Biomedical Engineering 63 (10), 1999-2006, 2016	59	2016
Initiatives, concepts, and implementation practices of FAIR (findable, accessible, interoperable, and reusable) data principles in health data stewardship practice: protocol … ET Inau, J Sack, D Waltemath, AA Zeleke JMIR research protocols 10 (2), e22505, 2021	50	2021
Democratizing knowledge representation with BioCypher S Lobentanzer, P Aloy, J Baumbach, B Bohar, VJ Carey, P Charoentong, ... Nature Biotechnology 41 (8), 1056-1059, 2023	43	2023
Specifications of standards in systems and synthetic biology: status and developments in 2020 F Schreiber, B Sommer, T Czauderna, M Golebiewski, TE Gorochowski, ... Journal of integrative bioinformatics 17 (2-3), 20200022, 2020	42	2020
Ranked retrieval of computational biology models R Henkel, L Endler, A Peters, N Le Novère, D Waltemath BMC bioinformatics 11, 1-12, 2010	41	2010
The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE) D Waltemath, M Golebiewski, ML Blinov, P Gleeson, H Hermjakob, ... Journal of integrative bioinformatics 17 (2-3), 20200005, 2020	36	2020
Improving the reuse of computational models through version control D Waltemath, R Henkel, R Hälke, M Scharm, O Wolkenhauer Bioinformatics 29 (6), 742-748, 2013	36	2013

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