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Arsenii Zinkevich
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H3K4me3, H3K9ac, H3K27ac, H3K27me3 and H3K9me3 histone tags suggest distinct regulatory evolution of open and condensed chromatin landmarks
AA Igolkina, A Zinkevich, KO Karandasheva, AA Popov, MV Selifanova, ...
Cells 8 (9), 1034, 2019
992019
HOCOMOCO in 2024: a rebuild of the curated collection of binding models for human and mouse transcription factors
IE Vorontsov, IA Eliseeva, A Zinkevich, M Nikonov, S Abramov, A Boytsov, ...
Nucleic Acids Research 52 (D1), D154-D163, 2024
462024
LegNet: a best-in-class deep learning model for short DNA regulatory regions
D Penzar, D Nogina, E Noskova, A Zinkevich, G Meshcheryakov, A Lando, ...
Bioinformatics 39 (8), 2022
252022
A community effort to optimize sequence-based deep learning models of gene regulation
AM Rafi, D Nogina, D Penzar, D Lee, D Lee, N Kim, S Kim, D Kim, Y Shin, ...
Nature Biotechnology, 1-11, 2024
10*2024
Ribonanza: deep learning of RNA structure through dual crowdsourcing
S He, R Huang, J Townley, RC Kretsch, TG Karagianes, DBT Cox, H Blair, ...
bioRxiv, 2024.02. 24.581671, 2024
102024
COVIDomic: A multi-modal cloud-based platform for identification of risk factors associated with COVID-19 severity
V Naumov, E Putin, S Pushkov, E Kozlova, K Romantsov, A Kalashnikov, ...
PLoS computational biology 17 (7), e1009183, 2021
92021
What do neighbors tell about you: the local context of cis-regulatory modules complicates prediction of regulatory variants
DD Penzar, AO Zinkevich, IE Vorontsov, VV Sitnik, AV Favorov, ...
Frontiers in Genetics 10, 1078, 2019
52019
Cross-platform DNA motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factors
IE Vorontsov, I Kozin, S Abramov, A Boytsov, A Jolma, M Albu, ...
bioRxiv, 2024.11. 11.619379, 2024
12024
A generative framework for enhanced cell-type specificity in rationally designed mRNAs
MS Khoroshkin, A Zinkevich, E Aristova, H Yousefi, SB Lee, T Mittmann, ...
bioRxiv, 2024.12. 31.630783, 2024
2024
Il sistema al momento non può eseguire l'operazione. Riprova più tardi.
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