Anna Gerasimova,PhD

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Ivan AdzhubeiHarvard Medical School, Dept of Bioimedical Informatics (DBMI)Email verificata su hms.harvard.edu
Peer BorkDirector of EMBL HeidelbergEmail verificata su embl.de
Steffen SchmidtUniversity of BayreuthEmail verificata su uni-bayreuth.de
Leonid PeshkinHarvard Medical SchoolEmail verificata su hms.harvard.edu
Shamil SunyaevProfessor of Biomedical Informatics and of Medicine (BWH), Harvard Medical SchoolEmail verificata su rics.bwh.harvard.edu
Vasily RamenskyNational Medical Research Center for Preventive Medicine, Moscow, RussiaEmail verificata su gnicpm.ru
Mikhail GelfandVice-President for Biomedical Research, SkoltechEmail verificata su skoltech.ru
Bjoern PetersProfessor at La Jolla Institute for ImmunologyEmail verificata su lji.org
Gregory SeumoisAssociate Professor, San Diego BioMed Research InstituteEmail verificata su sdbri.org
Pandurangan VijayanandProfessor, La Jolla Institute for ImmunologyEmail verificata su lji.org
Andrey MironovMoscow State University, dept Bioengineering and BioinformaticsEmail verificata su bioinf.fbb.msu.ru
Anjana RaoHarvard Medical SchoolEmail verificata su lji.org
Lukas ChavezAssociate Professor, Department of Medicine, University of California, San Diego (UCSD)Email verificata su ucsd.edu
Cecilia Lindestam ArlehamnLa Jolla Institute for Allergy and ImmunologyEmail verificata su liai.org
Vsevolod MakeevCancer Research UK, ManchesterEmail verificata su manchester.ac.uk
Dmitry RavcheevMRM HealthEmail verificata su nuigalway.ie
Alessandro SetteEmail verificata su liai.org
Alexander Favorovresearch [email protected]; senior fellow [email protected]Email verificata su sensi.org
Inna DubchakSenior Scientist, Lawrence Berkeley National Laboratory, USAEmail verificata su lbl.gov
Adam Paul ArkinDepartment of Bioengineering, University of California, Berkeley, Physical Biosciences Division, E.OEmail verificata su lbl.gov

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Anna Gerasimova,PhD

Associate Director of Bioinformatics, Quest Diagnostics

Email verificata su questdiagnostics.com

Assay development NGS analysis Data analysis


Titolo Ordina per citazioni Ordina per anno Ordina per titolo	Citata da Citata da	Anno
A method and server for predicting damaging missense mutations IA Adzhubei, S Schmidt, L Peshkin, VE Ramensky, A Gerasimova, P Bork, ... Nature methods 7 (4), 248-249, 2010	14770	2010
Deinococcus geothermalis: The Pool of Extreme Radiation Resistance Genes Shrinks KS Makarova, MV Omelchenko, EK Gaidamakova, VY Matrosova, ... PLoS One 2 (9), e955, 2007	299	2007
Memory T Cells in Latent Mycobacterium tuberculosis Infection Are Directed against Three Antigenic Islands and Largely Contained in a CXCR3+ CCR6+ Th1 Subset CSL Arlehamn, A Gerasimova, F Mele, R Henderson, J Swann, ... PLoS Pathogens 9 (1), e1003130, 2013	264	2013
Epigenomic analysis of primary human T cells reveals enhancers associated with T_H2 memory cell differentiation and asthma susceptibility G Seumois, L Chavez, A Gerasimova, M Lienhard, N Omran, L Kalinke, ... Nature immunology 15 (8), 777-788, 2014	218	2014
A Gibbs sampler for identification of symmetrically structured, spaced DNA motifs with improved estimation of the signal length AV Favorov, MS Gelfand, AV Gerasimova, DA Ravcheev, AA Mironov, ... Bioinformatics 21 (10), 2240-2245, 2005	164	2005
Transcriptional profile of tuberculosis antigen–specific T cells reveals novel multifunctional features CL Arlehamn, G Seumois, A Gerasimova, C Huang, Z Fu, X Yue, A Sette, ... The Journal of Immunology 193 (6), 2931-2940, 2014	114	2014
Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus DA Rodionov, PS Novichkov, ED Stavrovskaya, IA Rodionova, X Li, ... BMC genomics 12, 1-17, 2011	80	2011
Comparative genomic analysis of regulation of anaerobic respiration in ten genomes from three families of gamma-proteobacteria (Enterobacteriaceae, Pasteurellaceae, Vibrionaceae) DA Ravcheev, AV Gerasimova, AA Mironov, MS Gelfand BMC genomics 8, 1-17, 2007	67	2007
Comparative genomics of the dormancy regulons in mycobacteria A Gerasimova, AE Kazakov, AP Arkin, I Dubchak, MS Gelfand Journal of bacteriology 193 (14), 3446-3452, 2011	65	2011
Hypermutable non-synonymous sites are under stronger negative selection S Schmidt, A Gerasimova, FA Kondrashov, IA Adzuhbei, AS Kondrashov, ... PLoS genetics 4 (11), e1000281, 2008	49	2008
Predicting cell types and genetic variations contributing to disease by combining GWAS and epigenetic data A Gerasimova, L Chavez, B Li, G Seumois, J Greenbaum, A Rao, ... PloS one 8 (1), e54359, 2013	46	2013
Evolution of the NadR regulon in Enterobacteriaceae AV Gerasimova, MS Gelfand Journal of Bioinformatics and Computational Biology 3 (04), 1007-1019, 2005	31	2005
Development and validation of a high throughput SARS-CoV-2 whole genome sequencing workflow in a clinical laboratory SH Rosenthal, A Gerasimova, R Ruiz-Vega, K Livingston, RM Kagan, ... Scientific Reports 12 (1), 2054, 2022	25	2022
Gibbs sampler for identification of symmetrically structured, spaced DNA motifs with improved estimation of the signal length and its validation on the ArcA binding sites AV Favorov, MS Gelfand, AV Gerasimova, AA Mironov, VJ Makeev Proc of BGRS 2004, 269-72, 2004	23	2004
Identification of eight SARS-CoV-2 ORF7a deletion variants in 2,726 clinical specimens SH Rosenthal, RM Kagan, A Gerasimova, B Anderson, D Grover, M Hua, ... Biorxiv, 2020.12. 10.418855, 2020	18	2020
Computer analysis of regulatory signals in bacterial genomes. Fnr binding segments AV Gerasimova, DA Rodionov, AA Mironov, MS Gel'fand Molekuliarnaia biologiia 35 (6), 1001-1009, 2001	12	2001
Analytical validation and performance characteristics of a 48-gene next-generation sequencing panel for detecting potentially actionable genomic alterations in myeloid neoplasms SH Rosenthal, A Gerasimova, C Ma, HR Li, A Grupe, H Chong, A Acab, ... Plos one 16 (4), e0243683, 2021	11	2021
ArcA regulator of gamma-proteobacteria: identification of the binding signal and description of the regulon AV Gerasimova, MS Gelfand, VY Makeev, AA Mironov, AV Favorov Biophysics 48 (1), 21-25, 2003	10	2003
Development and Validation of a 34‐Gene Inherited Cancer Predisposition Panel Using Next‐Generation Sequencing SH Rosenthal, W Sun, K Zhang, Y Liu, Q Nguyen, A Gerasimova, C Nery, ... BioMed Research International 2020 (1), 3289023, 2020	8	2020
Computer analysis of regulatory signals in bacterial genomes. Fnr binding sites AV Gerasimova, DA Rodionov, AA Mironov, MS Gelfand Molecular Biology 35 (6), 853-861, 2001	4	2001

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