iLearnPlus: a comprehensive and automated machine-learning platform for nucleic acid and protein sequence analysis, prediction and visualization Z Chen, P Zhao, C Li, F Li, D Xiang, YZ Chen, T Akutsu, RJ Daly, GI Webb, ... Nucleic acids research 49 (10), e60-e60, 2021 | 184 | 2021 |
A de novo NADPH generation pathway for improving lysine production of Corynebacterium glutamicum by rational design of the coenzyme specificity of glyceraldehyde 3-phosphate … RR Bommareddy, Z Chen, S Rappert, AP Zeng Metabolic engineering 25, 30-37, 2014 | 181 | 2014 |
Metabolic engineering of Corynebacterium glutamicum for the production of 3-hydroxypropionic acid from glucose and xylose Z Chen, J Huang, Y Wu, W Wu, Y Zhang, D Liu Metabolic Engineering 39, 151-158, 2017 | 138 | 2017 |
Comprehensive review and assessment of computational methods for predicting RNA post-transcriptional modification sites from RNA sequences Z Chen, P Zhao, F Li, Y Wang, AI Smith, GI Webb, T Akutsu, A Baggag, ... Briefings in bioinformatics 21 (5), 1676-1696, 2020 | 129 | 2020 |
Toward glycerol biorefinery: metabolic engineering for the production of biofuels and chemicals from glycerol Z Chen, D Liu Biotechnology for biofuels 9, 1-15, 2016 | 120 | 2016 |
Deregulation of feedback inhibition of phosphoenolpyruvate carboxylase for improved lysine production in Corynebacterium glutamicum Z Chen, RR Bommareddy, D Frank, S Rappert, AP Zeng Applied and environmental microbiology 80 (4), 1388-1393, 2014 | 112 | 2014 |
Production of C2–C4 diols from renewable bioresources: new metabolic pathways and metabolic engineering strategies Y Zhang, D Liu, Z Chen Biotechnology for Biofuels 10, 299, 2017 | 104 | 2017 |
BERMP: a cross-species classifier for predicting m6A sites by integrating a deep learning algorithm and a random forest approach Y Huang, N He, Y Chen, Z Chen, L Li International journal of biological sciences 14 (12), 1669, 2018 | 98 | 2018 |
Protein engineering approaches to chemical biotechnology Z Chen, AP Zeng Current opinion in biotechnology 42, 198-205, 2016 | 86 | 2016 |
Coevolutionary analysis enabled rational deregulation of allosteric enzyme inhibition in Corynebacterium glutamicum for lysine production Z Chen, W Meyer, S Rappert, J Sun, AP Zeng Applied and environmental microbiology 77 (13), 4352-4360, 2011 | 78 | 2011 |
Metabolic engineering of Klebsiella pneumoniae for the de novo production of 2-butanol as a potential biofuel Z Chen, Y Wu, J Huang, D Liu Bioresource technology 197, 260-265, 2015 | 69 | 2015 |
Integrating molecular dynamics and co-evolutionary analysis for reliable target prediction and deregulation of the allosteric inhibition of aspartokinase for amino acid production Z Chen, S Rappert, J Sun, AP Zeng Journal of biotechnology 154 (4), 248-254, 2011 | 69 | 2011 |
Structural synthetic biotechnology: from molecular structure to predictable design for industrial strain development Z Chen, M Wilmanns, AP Zeng Trends in biotechnology 28 (10), 534-542, 2010 | 67 | 2010 |
Metabolic engineering of Corynebacterium glutamicum for the de novo production of ethylene glycol from glucose Z Chen, J Huang, Y Wu, D Liu Metabolic engineering 33, 12-18, 2016 | 63 | 2016 |
Protein design and engineering of a de novo pathway for microbial production of 1, 3‐propanediol from glucose Z Chen, F Geng, AP Zeng Biotechnology journal 10 (2), 284-289, 2015 | 62 | 2015 |
Systems metabolic engineering of Vibrio natriegens for the production of 1, 3-propanediol Y Zhang, Z Li, Y Liu, X Cen, D Liu, Z Chen Metabolic Engineering 65, 52-65, 2021 | 59 | 2021 |
Exploring the allosteric mechanism of dihydrodipicolinate synthase by reverse engineering of the allosteric inhibitor binding sites and its application for lysine production F Geng, Z Chen, P Zheng, J Sun, AP Zeng Applied microbiology and biotechnology 97, 1963-1971, 2013 | 55 | 2013 |
Efficient mining of natural NADH-utilizing dehydrogenases enables systematic cofactor engineering of lysine synthesis pathway of Corynebacterium glutamicum W Wu, Y Zhang, D Liu, Z Chen Metabolic Engineering 52, 77-86, 2019 | 54 | 2019 |
iFeatureOmega: an integrative platform for engineering, visualization and analysis of features from molecular sequences, structural and ligand data sets Z Chen, X Liu, P Zhao, C Li, Y Wang, F Li, T Akutsu, C Bain, RB Gasser, ... Nucleic acids research 50 (W1), W434-W447, 2022 | 53 | 2022 |
Regulation of 3-hydroxypropionaldehyde accumulation in Klebsiella pneumoniae by overexpression of dhaT and dhaD genes Z Chen, H Liu, D Liu Enzyme and Microbial Technology 45 (4), 305-309, 2009 | 51 | 2009 |