| Tools for microbiome analysis in R L Lahti, SA Shetty Bioconductor 1 (5), 28, 2017 | 1205* | 2017 |
| Intestinal microbiome landscaping: insight in community assemblage and implications for microbial modulation strategies SA Shetty, F Hugenholtz, L Lahti, H Smidt, WM de Vos FEMS microbiology reviews 41 (2), 182-199, 2017 | 234 | 2017 |
| Comparative genome analysis of Megasphaera sp. reveals niche specialization and its potential role in the human gut SA Shetty, NP Marathe, V Lanjekar, D Ranade, YS Shouche PloS one 8 (11), e79353, 2013 | 184 | 2013 |
| Comparative genomics and physiology of the butyrate‐producing bacterium Intestinimonas butyriciproducens TPN Bui, SA Shetty, I Lagkouvardos, J Ritari, B Chamlagain, FP Douillard, ... Environmental microbiology reports 8 (6), 1024-1037, 2016 | 127 | 2016 |
| Molecular characterization and meta-analysis of gut microbial communities illustrate enrichment of Prevotella and Megasphaera in Indian subjects S Bhute, P Pande, SA Shetty, R Shelar, S Mane, SV Kumbhare, A Gawali, ... Frontiers in microbiology 7, 660, 2016 | 126 | 2016 |
| Exploration of microbial diversity and community structure of Lonar Lake: the only hypersaline meteorite crater lake within basalt rock D Paul, SV Kumbhare, SS Mhatre, SP Chowdhury, SA Shetty, NP Marathe, ... Frontiers in microbiology 6, 1553, 2016 | 113 | 2016 |
| Comparison of small gut and whole gut microbiota of first-degree relatives with adult celiac disease patients and controls R Bodkhe, SA Shetty, DP Dhotre, AK Verma, K Bhatia, A Mishra, G Kaur, ... Frontiers in microbiology 10, 164, 2019 | 101 | 2019 |
| Reclassification of Eubacterium hallii as Anaerobutyricum hallii gen. nov., comb. nov., and description of Anaerobutyricum soehngenii sp. nov., a butyrate and … SA Shetty, S Zuffa, TPN Bui, S Aalvink, H Smidt, WM De Vos International Journal of Systematic and Evolutionary Microbiology 68 (12 …, 2018 | 99 | 2018 |
| Microbiome data science SA Shetty, L Lahti Journal of biosciences 44, 1-6, 2019 | 77 | 2019 |
| Prevalence and subtype analysis of Blastocystis in healthy Indian individuals PK Pandey, P Verma, N Marathe, S Shetty, A Bavdekar, MS Patole, ... Infection, Genetics and Evolution 31, 296-299, 2015 | 74 | 2015 |
| Changes in human gut flora with age: an Indian familial study N Marathe, S Shetty, V Lanjekar, D Ranade, Y Shouche BMC microbiology 12, 1-10, 2012 | 66 | 2012 |
| Flux, impact, and fate of halogenated xenobiotic compounds in the gut S Atashgahi, SA Shetty, H Smidt, WM De Vos Frontiers in physiology 9, 888, 2018 | 64 | 2018 |
| An inducible operon is involved in inulin utilization in Lactobacillus plantarum strains, as revealed by comparative proteogenomics and metabolic profiling N Buntin, T Hongpattarakere, J Ritari, FP Douillard, L Paulin, S Boeren, ... Applied and environmental microbiology 83 (2), e02402-16, 2017 | 62 | 2017 |
| Multi-kingdom characterization of the core equine fecal microbiota based on multiple equine (sub) species JE Edwards, SA Shetty, P Van Den Berg, F Burden, DA Van Doorn, ... Animal Microbiome 2, 1-16, 2020 | 60 | 2020 |
| Opportunities and challenges for gut microbiome studies in the Indian population SA Shetty, NP Marathe, YS Shouche Microbiome 1, 1-12, 2013 | 59 | 2013 |
| Inter-species metabolic interactions in an in-vitro minimal human gut microbiome of core bacteria SA Shetty, B Kuipers, S Atashgahi, S Aalvink, H Smidt, WM de Vos npj Biofilms and Microbiomes 8 (1), 21, 2022 | 52 | 2022 |
| Unravelling lactate‐acetate and sugar conversion into butyrate by intestinal Anaerobutyricum and Anaerostipes species by comparative proteogenomics SA Shetty, S Boeren, TPN Bui, H Smidt, WM de Vos Environmental Microbiology, 2020 | 51 | 2020 |
| Dynamic metabolic interactions and trophic roles of human gut microbes identified using a minimal microbiome exhibiting ecological properties SA Shetty, I Kostopoulos, SY Geerlings, H Smidt, WM de Vos, C Belzer The ISME Journal 16 (9), 2144-2159, 2022 | 41 | 2022 |
| Modulation of human intestinal microbiota in a clinical trial by consumption of a β-d-glucan-enriched extract obtained from Lentinula edodes D Morales, SA Shetty, B López-Plaza, C Gómez-Candela, H Smidt, ... European Journal of Nutrition 60, 3249-3265, 2021 | 40 | 2021 |
| Reconstructing functional networks in the human intestinal tract using synthetic microbiomes SA Shetty, H Smidt, WM de Vos Current opinion in biotechnology 58, 146-154, 2019 | 34 | 2019 |
Hauke SmidtPersonal Chair Complex Microbial Ecosystems, Wageningen University & ResearchEmail verificata su wur.nl