| Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4 A Blanco-Míguez, F Beghini, F Cumbo, LJ McIver, KN Thompson, M Zolfo, ... Nature Biotechnology 41 (11), 1633-1644, 2023 | 570 | 2023 |
| The person-to-person transmission landscape of the gut and oral microbiomes M Valles-Colomer, A Blanco-Míguez, P Manghi, F Asnicar, L Dubois, ... Nature 614 (7946), 125-135, 2023 | 279 | 2023 |
| Fecal microbiota transplantation plus anti-PD-1 immunotherapy in advanced melanoma: a phase I trial B Routy, JG Lenehan, WH Miller Jr, R Jamal, M Messaoudene, ... Nature medicine 29 (8), 2121-2132, 2023 | 194 | 2023 |
| Variability of strain engraftment and predictability of microbiome composition after fecal microbiota transplantation across different diseases G Ianiro, M Punčochář, N Karcher, S Porcari, F Armanini, F Asnicar, ... Nature Medicine 28 (9), 1913-1923, 2022 | 191 | 2022 |
| Genomic diversity and ecology of human-associated Akkermansia species in the gut microbiome revealed by extensive metagenomic assembly N Karcher, E Nigro, M Punčochář, A Blanco-Míguez, M Ciciani, P Manghi, ... Genome biology 22 (1), 209, 2021 | 114 | 2021 |
| Extension of the Segatella copri complex to 13 species with distinct large extrachromosomal elements and associations with host conditions A Blanco-Míguez, EJC Gálvez, E Pasolli, F De Filippis, L Amend, ... Cell host & microbe 31 (11), 1804-1819. e9, 2023 | 25 | 2023 |
| MetaPhlAn 4 profiling of unknown species-level genome bins improves the characterization of diet-associated microbiome changes in mice P Manghi, A Blanco-Míguez, S Manara, A NabiNejad, F Cumbo, F Beghini, ... Cell Reports 42 (5), 2023 | 17 | 2023 |
| Unexplored microbial diversity from 2,500 food metagenomes and links with the human microbiome N Carlino, A Blanco-Míguez, M Punčochář, C Mengoni, F Pinto, A Tatti, ... Cell 187 (20), 5775-5795. e15, 2024 | 16 | 2024 |
| Influence of microbiota-associated metabolic reprogramming on clinical outcome in patients with melanoma from the randomized adjuvant dendritic cell-based MIND-DC trial C Alves Costa Silva, G Piccinno, D Suissa, M Bourgin, G Schreibelt, ... Nature Communications 15 (1), 1633, 2024 | 9 | 2024 |
| Neuroblastoma is associated with alterations in gut microbiome composition subsequent to maternal microbial seeding M Valles-Colomer, P Manghi, F Cumbo, G Masetti, F Armanini, F Asnicar, ... EBioMedicine 99, 2024 | 7 | 2024 |
| Author Correction: Fecal microbiota transplantation plus anti-PD-1 immunotherapy in advanced melanoma: a phase I trial B Routy, JG Lenehan, WH Miller Jr, R Jamal, M Messaoudene, ... Nature Medicine 30 (2), 604-604, 2024 | 5 | 2024 |
