Szymon M. Kiełbasa

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Hanspeter HerzelInstitute for Theoretical BiologyEmail verificata su biologie.hu-berlin.de
Hailiang MeiLeiden University Medical CenterEmail verificata su lumc.nl
Kees van BergenLeiden University Medical CenterEmail verificata su ziggo.nl
Peter A.C. 't HoenProfessor Bioinformatics, Centre for Molecular and Biomolecular Informatics, Radboudumc NijmegenEmail verificata su radboudumc.nl
Nils BlüthgenCharité Universitätsmedizin Berlin & Humboldt Universität zu BerlinEmail verificata su charite.de
Martin VingronMax-Planck-Institut für molekulare GenetikEmail verificata su molgen.mpg.de
Paul HortonNCKU, TaiwanEmail verificata su iscb.org
Martin FrithUniversity of Tokyo, National Institute of Advanced Industrial Science and Technology (AIST)Email verificata su edu.k.u-tokyo.ac.jp
onno c meijerLeiden University Medical CenterEmail verificata su lumc.nl
Marcelo NavarreteProfessor of Molecular Medicine, University of MagallanesEmail verificata su umag.cl
Dieter BeuleBerlin Institute of Health, CharitéEmail verificata su bih-charite.de
Raymond WanUniversity of ManchesterEmail verificata su manchester.ac.uk
Paul QuaxLeiden University Medical Center, the NetherlandsEmail verificata su lumc.nl
P. Eline SlagboomProfessor Molecular Epidemiology, Leiden University Medical CenterEmail verificata su lumc.nl
Eka SuchimanLeiden University Medical CenterEmail verificata su lumc.nl
Bas HeijmansLeiden University Medical Center, The NetherlandsEmail verificata su lumc.nl
Lude FrankeProfessor of Functional Genomics, University Medical Centre GroningenEmail verificata su cleverfranke.com
Kengo SatoProfessor, Institute of Science Tokyo, JapanEmail verificata su m.isct.ac.jp
Maarten van ItersonLeiden University Medical CenterEmail verificata su lumc.nl
Kasia BozekCenter for Molecular Medicine CologneEmail verificata su uni-koeln.de

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Szymon M. Kiełbasa

Biomedical Data Sciences

Email verificata su lumc.nl

transcriptomics allelic expression genomic imprinting reference bias data science


Titolo Ordina per citazioni Ordina per anno Ordina per titolo	Citata da Citata da	Anno
Adaptive seeds tame genomic sequence comparison SM Kiełbasa, R Wan, K Sato, P Horton, MC Frith Genome research 21 (3), 487-493, 2011	1328	2011
Eleven grand challenges in single-cell data science D Lähnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ... Genome biology 21, 1-35, 2020	1158	2020
Disease variants alter transcription factor levels and methylation of their binding sites MJ Bonder, R Luijk, DV Zhernakova, M Moed, P Deelen, M Vermaat, ... Nature genetics 49 (1), 131-138, 2017	490	2017
Identification of context-dependent expression quantitative trait loci in whole blood DV Zhernakova, P Deelen, M Vermaat, M Van Iterson, M Van Galen, ... Nature genetics 49 (1), 139-145, 2017	473	2017
Evaluation of methods for modeling transcription factor sequence specificity MT Weirauch, A Cote, R Norel, M Annala, Y Zhao, TR Riley, ... Nature biotechnology 31 (2), 126-134, 2013	421	2013
Genetic and environmental influences interact with age and sex in shaping the human methylome J Van Dongen, MG Nivard, G Willemsen, JJ Hottenga, Q Helmer, ... Nature communications 7 (1), 11115, 2016	390	2016
Regulation of clock-controlled genes in mammals K Bozek, A Relógio, SM Kielbasa, M Heine, C Dame, A Kramer, H Herzel PloS one 4 (3), e4882, 2009	369	2009
Biological profiling of gene groups utilizing Gene Ontology N Blüthgen, K Brand, B Cajavec, M Swat, H Herzel, D Beule Genome Informatics 16 (1), 106-115, 2005	245	2005
DNA methylation analysis identifies loci for blood pressure regulation MA Richard, T Huan, S Ligthart, R Gondalia, MA Jhun, JA Brody, MR Irvin, ... The American Journal of Human Genetics 101 (6), 888-902, 2017	193	2017
RNA sequencing data integration reveals an miRNA interactome of osteoarthritis cartilage RC de Almeida, YFM Ramos, A Mahfouz, W den Hollander, N Lakenberg, ... Annals of the rheumatic diseases 78 (2), 270-277, 2019	177	2019
Mutations in PIGO, a member of the GPI-anchor-synthesis pathway, cause hyperphosphatasia with mental retardation PM Krawitz, Y Murakami, J Hecht, U Krüger, SE Holder, GR Mortier, ... The American Journal of Human Genetics 91 (1), 146-151, 2012	168	2012
Improving phenotypic prediction by combining genetic and epigenetic associations S Shah, MJ Bonder, RE Marioni, Z Zhu, AF McRae, A Zhernakova, ... The American Journal of Human Genetics 97 (1), 75-85, 2015	161	2015
Skewed X-inactivation is common in the general female population E Shvetsova, A Sofronova, R Monajemi, K Gagalova, HHM Draisma, ... European Journal of Human Genetics 27 (3), 455-465, 2019	146	2019
Two Plasmodium 6‐Cys family‐related proteins have distinct and critical roles in liver‐stage development T Annoura, BCL van Schaijk, IHJ Ploemen, M Sajid, J Lin, MW Vos, ... The FASEB Journal 28 (5), 2158-2170, 2014	112	2014
Quaking promotes monocyte differentiation into pro-atherogenic macrophages by controlling pre-mRNA splicing and gene expression RG De Bruin, L Shiue, J Prins, HC De Boer, A Singh, WS Fagg, ... Nature communications 7 (1), 10846, 2016	108	2016
Identification of Y-box binding protein 1 as a core regulator of MEK/ERK pathway-dependent gene signatures in colorectal cancer cells K Jürchott, RJ Kuban, T Krech, N Blüthgen, U Stein, W Walther, C Friese, ... PLoS genetics 6 (12), e1001231, 2010	103	2010
Refined mapping of autoimmune disease associated genetic variants with gene expression suggests an important role for non-coding RNAs I Ricaño-Ponce, DV Zhernakova, P Deelen, O Luo, X Li, A Isaacs, ... Journal of autoimmunity 68, 62-74, 2016	91	2016
Measuring similarities between transcription factor binding sites SM Kielbasa, D Gonze, H Herzel BMC bioinformatics 6, 1-11, 2005	85	2005
Comprehensive diagnostics of acute myeloid leukemia by whole transcriptome RNA sequencing W Arindrarto, DM Borràs, RAL de Groen, RR van den Berg, IJ Locher, ... Leukemia 35 (1), 47-61, 2021	82	2021
Integrating omics datasets with the OmicsPLS package S Bouhaddani, HW Uh, G Jongbloed, C Hayward, L Klarić, SM Kiełbasa, ... BMC bioinformatics 19, 1-9, 2018	80	2018

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