Anne E. Carpenter

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Shantanu SinghBroad Institute of MIT and HarvardEmail verificata su broad.mit.edu
Beth A CiminiBroad InstituteEmail verificata su broadinstitute.org
Mark-Anthony BrayNovartis Institutes for BioMedical ResearchEmail verificata su novartis.com
Juan C. CaicedoUniversity of Wisconsin-MadisonEmail verificata su wisc.edu
Thouis (Ray) JonesBroad InstituteEmail verificata su broadinstitute.org
David M. SabatiniInstitute of Organic Chemistry and Biochemistry of the CASEmail verificata su uochb.cas.cz
Vebjorn LjosaComputational biologist, Broad Institute of MIT and HarvardEmail verificata su broad.mit.edu
Minh DoanM.D., Ph.D., Head of Bioimaging Analytics, GlaxoSmithKlineEmail verificata su broadinstitute.org
Polina GollandMassachusetts Institute of TechnologyEmail verificata su mit.edu
Kevin EliceiriRRF Walter H. Helmerich Professor Medical Physics, Biomedical Engineering, UW-MadisonEmail verificata su wisc.edu
Dr. rer. nat. Tim BeckerIAV GmbHEmail verificata su iav.de
Michael R. LamprechtHealth Tech Investor @ TenmileEmail verificata su columbia.edu
David GuertinUMass Medical SchoolEmail verificata su umassmed.edu
Mohammad Hossein RohbanAssociate Professor in Computer Engineering, Sharif University of TechnologyEmail verificata su sharif.edu
David E. RootBroad InstituteEmail verificata su broadinstitute.org
Jason MoffatSenior Scientist & Program Head, Genetics & Genome Biology, Sickkids Hospital; Professor, UofTEmail verificata su utoronto.ca
Andrew BelmontProfessor of Cell and Developmental Biology, University of IllinoisEmail verificata su illinois.edu
Holger HennigBroad Institute of Harvard and MIT, Cambridge, USAEmail verificata su broadinstitute.org
Andrew FilbyProfessor of Practice in Emerging Biomedical Technologies at Newcastle UniversityEmail verificata su Newcastle.ac.uk
Marzieh HaghighiPhD, Broad Institute of MIT and HarvardEmail verificata su broadinstitute.org

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Anne E. Carpenter

Institute Scientist and Imaging Platform Director, Broad Institute of Harvard and MIT

Email verificata su broadinstitute.org - Home page

drug discovery machine learning Cell Painting image-based profiling high content screening


Titolo Ordina per citazioni Ordina per anno Ordina per titolo	Citata da Citata da	Anno
CellProfiler: image analysis software for identifying and quantifying cell phenotypes AE Carpenter, TR Jones, MR Lamprecht, C Clarke, IH Kang, O Friman, ... Genome biology 7, 1-11, 2006	5930	2006
Opportunities and obstacles for deep learning in biology and medicine T Ching, DS Himmelstein, BK Beaulieu-Jones, AA Kalinin, BT Do, ... Journal of the royal society interface 15 (141), 20170387, 2018	2279	2018
A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen J Moffat, DA Grueneberg, X Yang, SY Kim, AM Kloepfer, G Hinkle, ... Cell 124 (6), 1283-1298, 2006	2074	2006
CellProfiler 3.0: Next-generation image processing for biology C McQuin, A Goodman, V Chernyshev, L Kamentsky, BA Cimini, ... PLoS biology 16 (7), e2005970, 2018	1949	2018
mTOR complex 1 regulates lipin 1 localization to control the SREBP pathway TR Peterson, SS Sengupta, TE Harris, AE Carmack, SA Kang, E Balderas, ... Cell 146 (3), 408-420, 2011	1387	2011
CellProfiler 4: improvements in speed, utility and usability DR Stirling, MJ Swain-Bowden, AM Lucas, AE Carpenter, BA Cimini, ... BMC bioinformatics 22, 1-11, 2021	1243	2021
Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software L Kamentsky, TR Jones, A Fraser, MA Bray, DJ Logan, KL Madden, ... Bioinformatics 27 (8), 1179-1180, 2011	1158	2011
CellProfiler™: free, versatile software for automated biological image analysis MR Lamprecht, DM Sabatini, AE Carpenter Biotechniques 42 (1), 71-75, 2007	1128	2007
Cell Painting, a high-content image-based assay for morphological profiling using multiplexed fluorescent dyes MA Bray, S Singh, H Han, CT Davis, B Borgeson, C Hartland, ... Nature protocols 11 (9), 1757-1774, 2016	903	2016
Nucleus segmentation across imaging experiments: the 2018 Data Science Bowl JC Caicedo, A Goodman, KW Karhohs, BA Cimini, J Ackerman, ... Nature methods 16 (12), 1247-1253, 2019	708	2019
Data-analysis strategies for image-based cell profiling JC Caicedo, S Cooper, F Heigwer, S Warchal, P Qiu, C Molnar, ... Nature methods 14 (9), 849-863, 2017	707	2017
CellProfiler Analyst: data exploration and analysis software for complex image-based screens T Jones, I Kang, D Wheeler, R Lindquist, A Papallo, D Sabatini, P Golland, ... BMC bioinformatics 9 (1), 482, 2008	649	2008
Biological imaging software tools KW Eliceiri, MR Berthold, IG Goldberg, L Ibáñez, BS Manjunath, ... Nature methods 9 (7), 697-710, 2012	646	2012
Long-range directional movement of an interphase chromosome site CH Chuang, AE Carpenter, B Fuchsova, T Johnson, P de Lanerolle, ... Current Biology 16 (8), 825-831, 2006	618	2006
Annotated high-throughput microscopy image sets for validation. V Ljosa, KL Sokolnicki, AE Carpenter Nature methods 9 (7), 637-637, 2012	611	2012
In germ cells of mouse embryonic ovaries, the decision to enter meiosis precedes premeiotic DNA replication AE Baltus, DB Menke, YC Hu, ML Goodheart, AE Carpenter, DG De Rooij, ... Nature genetics 38 (12), 1430-1434, 2006	583	2006
Scoring diverse cellular morphologies in image-based screens with iterative feedback and machine learning TR Jones, AE Carpenter, MR Lamprecht, J Moffat, SJ Silver, JK Grenier, ... Proceedings of the National Academy of Sciences 106 (6), 1826-1831, 2009	454	2009
An algorithm-based topographical biomaterials library to instruct cell fate HV Unadkat, M Hulsman, K Cornelissen, BJ Papenburg, ... Proceedings of the National Academy of Sciences 108 (40), 16565-16570, 2011	438	2011
Systematic genome-wide screens of gene function AE Carpenter, DM Sabatini Nature Reviews Genetics 5 (1), 11-22, 2004	413	2004
The bromodomain protein Brd4 insulates chromatin from DNA damage signalling SR Floyd, ME Pacold, Q Huang, SM Clarke, FC Lam, IG Cannell, ... Nature 498 (7453), 246-250, 2013	355	2013

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