| Hyenadna: Long-range genomic sequence modeling at single nucleotide resolution E Nguyen, M Poli, M Faizi, A Thomas, M Wornow, C Birch-Sykes, ... Advances in neural information processing systems 36, 2024 | 246 | 2024 |
| Quantitative insights into the cyanobacterial cell economy T Zavřel, M Faizi, C Loureiro, G Poschmann, K Stühler, M Sinetova, ... Elife 8, e42508, 2019 | 99 | 2019 |
| A model of optimal protein allocation during phototrophic growth M Faizi, T Zavřel, C Loureiro, J Červený, R Steuer Biosystems 166, 26-36, 2018 | 27 | 2018 |
| Optimal proteome allocation strategies for phototrophic growth in a light-limited chemostat M Faizi, R Steuer Microbial cell factories 18, 1-18, 2019 | 13 | 2019 |
| Temporal regulation of gene expression through integration of p53 dynamics and modifications D Lu, M Faizi, B Drown, A Simerzin, J François, G Bradshaw, N Kelleher, ... Science Advances 10 (43), eadp2229, 2024 | | 2024 |
| MSModDetector: a tool for detecting mass shifts and post-translational modifications in individual ion mass spectrometry data M Faizi, RT Fellers, D Lu, BS Drown, A Jambhekar, G Lahav, NL Kelleher, ... Bioinformatics 40 (6), 2024 | | 2024 |