| An end-to-end heterogeneous graph representation learning-based framework for drug–target interaction prediction J Peng, Y Wang, J Guan, J Li, R Han, J Hao, Z Wei, X Shang Briefings in bioinformatics 22 (5), bbaa430, 2021 | 157 | 2021 |
| DFinder: a novel end-to-end graph embedding-based method to identify drug–food interactions T Wang, J Yang, Y Xiao, J Wang, Y Wang, X Zeng, Y Wang, J Peng Bioinformatics 39 (1), btac837, 2023 | 17 | 2023 |
| A network-based method for brain disease gene prediction by integrating brain connectome and molecular network W Wang, R Han, M Zhang, Y Wang, T Wang, Y Wang, X Shang, J Peng Briefings in Bioinformatics 23 (1), bbab459, 2022 | 16 | 2022 |
| A review and performance evaluation of clustering frameworks for single-cell Hi-C data C Zhen, Y Wang, J Geng, L Han, J Li, J Peng, T Wang, J Hao, X Shang, ... Briefings in Bioinformatics 23 (6), bbac385, 2022 | 12 | 2022 |
| Toolace: Winning the points of llm function calling W Liu, X Huang, X Zeng, X Hao, S Yu, D Li, S Wang, W Gan, Z Liu, Y Yu, ... arXiv preprint arXiv:2409.00920, 2024 | 11 | 2024 |
| Predicting hepatoma-related genes based on representation learning of PPI network and gene ontology annotations T Wang, Z Shao, Y Xiao, X Zhang, Y Chen, B Shi, S Chen, Y Wang, ... 2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2021 | 6 | 2021 |
| A deep learning-based genome-wide polygenic risk score for common diseases identifies individuals with risk J Peng, J Li, R Han, Y Wang, L Han, J Peng, T Wang, J Hao, X Shang, ... medRxiv, 2021.11. 17.21265352, 2021 | 6 | 2021 |
| A novel framework for single-cell Hi-C clustering based on graph-convolution-based imputation and two-phase-based feature extraction C Zhen, Y Wang, L Han, J Li, J Peng, T Wang, J Hao, X Shang, Z Wei, ... bioRxiv, 2021.04. 30.442215, 2021 | 6 | 2021 |
| Developing better digital health measures of parkinson’s disease using free living data and a crowdsourced data analysis challenge SK Sieberts, H Borzymowski, Y Guan, Y Huang, A Matzner, A Page, ... PLOS Digital Health 2 (3), e0000208, 2023 | 5 | 2023 |
| DeepRisk: A deep learning approach for genome-wide assessment of common disease risk J Peng, Z Bao, J Li, R Han, Y Wang, L Han, J Peng, T Wang, J Hao, Z Wei, ... Fundamental Research 4 (4), 752-760, 2024 | 1 | 2024 |
| Boosting Tool Use of Large Language Models via Iterative Reinforced Fine-Tuning Y Zeng, X Ding, Y Wang, W Liu, W Ning, Y Hou, X Huang, B Qin, T Liu arXiv preprint arXiv:2501.09766, 2025 | | 2025 |
| Identifying brain disease genes via integrating brain imaging and molecular network W Wang, Y Wang, J Peng 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2024 | | 2024 |
Jiajie PengNorthwestern Polytechnical University;Harvard Medical School;Harbin Institute of Technologyכתובת אימייל מאומתת בדומיין bwh.harvard.edu
