| LiteMol suite: interactive web-based visualization of large-scale macromolecular structure data D Sehnal, M Deshpande, RS Vařeková, S Mir, K Berka, A Midlik, L Pravda, ... Nature Methods 14 (12), 1121-1122, 2017 | 141 | 2017 |
| A study on bioluminescence and photoluminescence in the earthworm Eisenia lucens O Pes, A Midlik, J Schlaghamersky, M Zitnan, P Taborsky Photochemical & Photobiological Sciences 15, 175-180, 2016 | 30 | 2016 |
| Sanguinarine is reduced by NADH through a covalent adduct R Sandor, J Slanina, A Midlik, K Sebrlova, L Novotna, M Carnecka, ... Phytochemistry 145, 77-84, 2018 | 20 | 2018 |
| Identification of metabolites of selected benzophenanthridine alkaloids and their toxicity evaluation R Sandor, A Midlik, K Sebrlova, G Dovrtelova, K Noskova, J Jurica, ... Journal of pharmaceutical and biomedical analysis 121, 174-180, 2016 | 16 | 2016 |
| Uncovering of cytochrome P450 anatomy by SecStrAnnotator A Midlik, V Navrátilová, TR Moturu, J Koča, R Svobodová, K Berka Scientific Reports 11 (1), 12345, 2021 | 15 | 2021 |
| 2DProts: database of family-wide protein secondary structure diagrams I Hutařová Vařeková, J Hutař, A Midlik, V Horský, E Hladká, R Svobodová, ... Bioinformatics 37 (23), 4599-4601, 2021 | 6 | 2021 |
| Visualization and analysis of protein structures with litemol suite D Sehnal, R Svobodová, K Berka, L Pravda, A Midlik, J Koča Structural Bioinformatics: Methods and Protocols, 1-13, 2020 | 6 | 2020 |
| Automated family-wide annotation of secondary structure elements A Midlik, I Hutařová Vařeková, J Hutař, TR Moturu, V Navrátilová, J Koča, ... Protein Supersecondary Structures: Methods and Protocols, 47-71, 2019 | 6 | 2019 |
| OverProt: secondary structure consensus for protein families A Midlik, I Hutařová Vařeková, J Hutař, A Chareshneu, K Berka, ... Bioinformatics 38 (14), 3648-3650, 2022 | 3 | 2022 |
| Secondary Structure Elements-Annotations and Schematic 2D Visualizations Stable for Individual Protein Families RS Varekova, A Midlik, IH Varekova, J Hutar, V Navratilova, J Koca, ... Biophysical Journal 114 (3), 46a-47a, 2018 | 2 | 2018 |
| Describing and sharing molecular visualizations using the MolViewSpec toolkit S Bittrich, A Midlik, M Varadi, S Velankar, SK Burley, JY Young, D Sehnal, ... Current Protocols 4 (7), e1099, 2024 | 1 | 2024 |
| Mol* Volumes and Segmentations: visualization and interpretation of cell imaging data alongside macromolecular structure data and biological annotations A Chareshneu, A Midlik, CM Ionescu, A Rose, V Horský, A Cantara, ... Nucleic Acids Research 51 (W1), W326-W330, 2023 | 1 | 2023 |
| Real-time interactive visualisation of large macromolecular assemblies and molecular machines at atomic resolution D Sehnal, M Deshpande, RS Varekova, S Mir, K Berka, A Midlik, L Pravda, ... Biophysical Journal 112 (3), 178a, 2017 | 1 | 2017 |
| LiteMol: web-based 3D visualization of macromolecular structure data MJ Conroy, D Sehnal, M Deshpande, R Svobodova, S Mir, K Berka, ... ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES 73, C669-C669, 2017 | 1 | 2017 |
| Studium metabolismu benzofenantridinových alkaloidu A Midlik | 1 | 2016 |
| AlphaFold Protein Structure Database and 3D-Beacons: New Data and Capabilities J Fleming, P Magaña, S Nair, M Tsenkov, D Bertoni, I Pidruchna, ... Journal of Molecular Biology, 168967, 2025 | | 2025 |
| PDBImages: a command-line tool for automated macromolecular structure visualization A Midlik, S Nair, S Anyango, M Deshpande, D Sehnal, M Varadi, ... Bioinformatics 39 (12), btad744, 2023 | | 2023 |
| Discovering the general architecture of protein families with OverProt A Midlik, I Hutařová Vařeková, J Hutař, A Chareshneu, R Svobodová, ... ENBIK2022 conference proceedings, 7, 2022 | | 2022 |
| Interactive 3D Macromolecular Structure Data Mining with MolQL and Litemol Suite D Sehnal, M Deshpande, A Rose, L Pravda, A Midlik, RS Vařeková, S Mir, ... Biophysical Journal 114 (3), 47a, 2018 | | 2018 |
| Secondary Structure Elements-Annotations and Schematic 2D Visualizations Stable for Individual Protein Families R Svobodová, A Midlik, I Hutařová Vařeková, J Hutař, V Navrátilová, ... | | 2018 |