Clinical information extraction applications: a literature review Y Wang, L Wang, M Rastegar-Mojarad, S Moon, F Shen, N Afzal, S Liu, ... Journal of biomedical informatics 77, 34-49, 2018 | 900 | 2018 |
A comparison of word embeddings for the biomedical natural language processing Y Wang, S Liu, N Afzal, M Rastegar-Mojarad, L Wang, F Shen, ... Journal of biomedical informatics 87, 12-20, 2018 | 449 | 2018 |
A clinical text classification paradigm using weak supervision and deep representation Y Wang, S Sohn, S Liu, F Shen, L Wang, EJ Atkinson, S Amin, H Liu BMC medical informatics and decision making 19, 1-13, 2019 | 235 | 2019 |
Characterizing long COVID: deep phenotype of a complex condition RR Deer, MA Rock, N Vasilevsky, L Carmody, H Rando, AJ Anzalone, ... EBioMedicine 74, 2021 | 199 | 2021 |
Clinical concept extraction: a methodology review S Fu, D Chen, H He, S Liu, S Moon, KJ Peterson, F Shen, L Wang, ... Journal of biomedical informatics 109, 103526, 2020 | 173 | 2020 |
MedSTS: a resource for clinical semantic textual similarity Y Wang, N Afzal, S Fu, L Wang, F Shen, M Rastegar-Mojarad, H Liu Language Resources and Evaluation 54, 57-72, 2020 | 151 | 2020 |
Systematic analysis of adverse event reports for sex differences in adverse drug events Y Yu, J Chen, D Li, L Wang, W Wang, H Liu Scientific reports 6 (1), 24955, 2016 | 138 | 2016 |
Deep phenotyping on electronic health records facilitates genetic diagnosis by clinical exomes JH Son, G Xie, C Yuan, L Ena, Z Li, A Goldstein, L Huang, L Wang, ... The American Journal of Human Genetics 103 (1), 58-73, 2018 | 114 | 2018 |
CancerBERT: a cancer domain-specific language model for extracting breast cancer phenotypes from electronic health records S Zhou, N Wang, L Wang, H Liu, R Zhang Journal of the American Medical Informatics Association 29 (7), 1208-1216, 2022 | 84 | 2022 |
The role of p-STAT3 as a prognostic and clinicopathological marker in colorectal cancer: a systematic review and meta-analysis K Ji, M Zhang, Q Chu, Y Gan, H Ren, L Zhang, L Wang, X Li, W Wang PLoS One 11 (8), e0160125, 2016 | 59 | 2016 |
Implementation of preemptive DNA sequence–based pharmacogenomics testing across a large academic medical center: The Mayo-Baylor RIGHT 10K Study L Wang, SE Scherer, SJ Bielinski, DM Muzny, LA Jones, JL Black III, ... Genetics in Medicine 24 (5), 1062-1072, 2022 | 52 | 2022 |
Overview of the BioCreative/OHNLP challenge 2018 task 2: clinical semantic textual similarity Y Wang, N Afzal, S Liu, M Rastegar-Mojarad, L Wang, F Shen, S Fu, H Liu Proceedings of the BioCreative/OHNLP Challenge 2018 (6), 15, 2018 | 49 | 2018 |
Discovery of noncancer drug effects on survival in electronic health records of patients with cancer: a new paradigm for drug repurposing Y Wu, JL Warner, L Wang, M Jiang, J Xu, Q Chen, H Nian, Q Dai, X Du, ... JCO clinical cancer informatics 3, 1-9, 2019 | 47 | 2019 |
Proton pump inhibitors and the risk for fracture at specific sites: data mining of the FDA adverse event reporting system L Wang, M Li, Y Cao, Z Han, X Wang, EJ Atkinson, H Liu, S Amin Scientific reports 7 (1), 5527, 2017 | 47 | 2017 |
Cohort profile: the right drug, right dose, right time: using genomic data to individualize treatment protocol (RIGHT protocol) SJ Bielinski, JL St Sauver, JE Olson, NB Larson, JL Black III, SE Scherer, ... International journal of epidemiology 49 (1), 23-24k, 2020 | 46 | 2020 |
Dependency and AMR embeddings for drug-drug interaction extraction from biomedical literature Y Wang, S Liu, M Rastegar-Mojarad, L Wang, F Shen, F Liu, H Liu Proceedings of the 8th acm international conference on bioinformatics …, 2017 | 44 | 2017 |
Natural language processing for populating lung cancer clinical research data L Wang, L Luo, Y Wang, J Wampfler, P Yang, H Liu BMC medical informatics and decision making 19, 1-10, 2019 | 42 | 2019 |
HPO2Vec+: Leveraging heterogeneous knowledge resources to enrich node embeddings for the Human Phenotype Ontology F Shen, S Peng, Y Fan, A Wen, S Liu, Y Wang, L Wang, H Liu Journal of biomedical informatics 96, 103246, 2019 | 40 | 2019 |
Standardizing adverse drug event reporting data L Wang, G Jiang, D Li, H Liu Journal of biomedical semantics 5, 1-13, 2014 | 40 | 2014 |
Assessment of electronic health record for cancer research and patient care through a scoping review of cancer natural language processing L Wang, S Fu, A Wen, X Ruan, H He, S Liu, S Moon, M Mai, IB Riaz, ... JCO Clinical Cancer Informatics 6, e2200006, 2022 | 39 | 2022 |