| Highly coordinated proteome dynamics during reprogramming of somatic cells to pluripotency J Hansson, MR Rafiee, S Reiland, JM Polo, J Gehring, S Okawa, W Huber, ... Cell reports 2 (6), 1579-1592, 2012 | 285 | 2012 |
| Two novel splice variants of SOX2OT, SOX2OT-S1, and SOX2OT-S2 are coupregulated with SOX2 and OCT4 in esophageal squamous cell carcinoma A Shahryari, MR Rafiee, Y Fouani, NA Oliae, NM Samaei, M Shafiee, ... Stem cells 32 (1), 126-134, 2014 | 139 | 2014 |
| Expanding the circuitry of pluripotency by selective isolation of chromatin-associated proteins MR Rafiee, C Girardot, G Sigismondo, J Krijgsveld Molecular cell 64 (3), 624-635, 2016 | 120 | 2016 |
| OCT4B1, a novel spliced variant of OCT4, generates a stable truncated protein with a potential role in stress response EF Yazd, MR Rafiee, M Soleimani, M Tavallaei, MK Salmani, SJ Mowla Cancer letters 309 (2), 170-175, 2011 | 66 | 2011 |
| Protease‐resistant streptavidin for interaction proteomics MR Rafiee, G Sigismondo, M Kalxdorf, L Förster, B Brügger, J Béthune, ... Molecular systems biology 16 (5), e9370, 2020 | 60 | 2020 |
| Multi-level and lineage-specific interactomes of the Hox transcription factor Ubx contribute to its functional specificity J Carnesecchi, G Sigismondo, K Domsch, CEP Baader, MR Rafiee, ... Nature Communications 11 (1), 1388, 2020 | 37 | 2020 |
| Cell-specific bioorthogonal tagging of glycoproteins A Cioce, B Calle, T Rizou, SC Lowery, VL Bridgeman, KE Mahoney, ... Nature Communications 13 (1), 6237, 2022 | 31 | 2022 |
| TRIM28-dependent SUMOylation protects the adult ovary from activation of the testicular pathway M Rossitto, S Déjardin, CM Rands, S Le Gras, R Migale, MR Rafiee, ... Nature Communications 13 (1), 4412, 2022 | 26 | 2022 |
| A plausible anti-apoptotic role of up-regulated OCT4B1 in bladder tumors J Asadzadeh, MH Asadi, N Shakhssalim, MR Rafiee, HR Kalhor, ... Urology journal 9 (3), 574-580, 2012 | 26 | 2012 |
| Identification of therapeutic targets of the hijacked super-enhancer complex in EVI1-rearranged leukemia S Kiehlmeier, MR Rafiee, A Bakr, J Mika, S Kruse, J Müller, S Schweiggert, ... Leukemia 35 (11), 3127-3138, 2021 | 25 | 2021 |
| Chromatin-contact atlas reveals disorder-mediated protein interactions and moonlighting chromatin-associated RBPs MR Rafiee, JA Zagalak, S Sidorov, S Steinhauser, K Davey, J Ule, ... Nucleic Acids Research 49 (22), 13092-13107, 2021 | 17* | 2021 |
| Enrichment of a rare subpopulation of miR-302-expressing glioma cells by serum deprivation MR Rafiee, AM Shafaroudi, S Rohban, H Khayatzadeh, HR Kalhor, ... Cell Journal (Yakhteh) 16 (4), 494, 2015 | 14 | 2015 |
| Chromatin-directed proteomics identifies ZNF84 as a p53-independent regulator of p21 in genotoxic stress response A Strzeszewska-Potyrała, K Staniak, J Czarnecka-Herok, MR Rafiee, ... Cancers 13 (9), 2115, 2021 | 11 | 2021 |
| Analysis of Y-chromosomal short tandem repeat (STR) polymorphism in an Iranian Sadat population MR Rafiee, A Sokhansanj, MA Naghizadeh, A Farazmand Russian Journal of Genetics 45, 969-973, 2009 | 10 | 2009 |
| Identification of salt-inducible peptide with putative kinase activity in halophilic bacterium Virgibacillus halodenitrificans MR Rafiee, A Sokhansanj, M Yoosefi, MA Naghizadeh Journal of bioscience and Bioengineering 104 (3), 178-181, 2007 | 8 | 2007 |
| RNA polymerase II-associated proteins reveal pathways affected in VCP-related amyotrophic lateral sclerosis MR Rafiee, S Rohban, K Davey, J Ule, NM Luscombe Brain 146 (6), 2547-2556, 2023 | 7 | 2023 |
| Quantitative proteomics identifies TCF1 as a negative regulator of Foxp3 expression in conventional T cells M Delacher, MM Barra, Y Herzig, K Eichelbaum, MR Rafiee, DM Richards, ... Iscience 23 (5), 2020 | 7 | 2020 |
| FOXL2 interaction with different binding partners regulates the dynamics of ovarian development R Migale, M Neumann, R Mitter, MR Rafiee, S Wood, J Olsen, ... Science advances 10 (12), eadl0788, 2024 | 6 | 2024 |
| Human Integrator provides a quality checkpoint during elongation to facilitate RNA polymerase II processivity S Rohban, MR Rafiee, J Ule, NM Luscombe bioRxiv, 2023.02. 17.528960, 2023 | 6 | 2023 |
| Using ChIP-SICAP to identify proteins that co-localize in chromatin MR Rafiee, J Krijgsveld Enhancers and Promoters: Methods and Protocols, 275-288, 2021 | 6 | 2021 |
